Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04317 ATGGTGGCAACTGGAGTTGCAACAGCAGCATCAGCATACACTCACATTCACATACACCTCACAGAAATTTCCGCTTCAAAATCAATGGAATTGAAATGGGTAAGAACAAGAATCAACAAAACCTCACAACTTAACAACAACAAAGAAAAATTGCTATCCACACCCCTTCTCCCAGTTTACATTTCCACTAACCCACAACACGTCGATCCTCAAAATCTCCGAGACCTCTGCTACACTTGTAACCACTCTTTCAACAGATTCCCCAACCTCAAAAACTCCGAAACCTCTGAACCTGTTAATATCAACAAGCTTCGCATTGCTCTTTCTCACAGTGATGTTCTTGTTTCTGTCTTCTGTAAACCTCATCTTGTTGATGGTTTGGTTGAATCTTCATCTTCTATTGTGGATTTCTTCACTCCGGTTTCACCTTCATGTGATTTGTTGGTTGGGTTTGGTCGTGCTGTTTCTGATTGTGGTCTCACTGCTTCTATTTATGATGTCATGGTTATTCCATCCTTGCGGAGAATGGGAATTGGAAAAATTATTGTTAAGAAAATTTTGAGGATTCTTACAAATAGAGACATCTACGACATAGCAGCCCTTTGCTCAGAGGATGAGAGGTTGTTTTTTAAGGCTTGTGGATTTGGTGGTGACATTTTGGACTCTACTACCATGATGTACACAAGAACCGCTTCGTCAACAATCCAGGAAGGTGAGCAAACCATCATATGCGCAGGCCGAAAGCTATTGTTGGTTCCACCTCTGATTGAGAGACCCTACAAATCATCGAGACAATAA 798 0.4123 MVATGVATAASAYTHIHIHLTEISASKSMELKWVRTRINKTSQLNNNKEKLLSTPLLPVYISTNPQHVDPQNLRDLCYTCNHSFNRFPNLKNSETSEPVNINKLRIALSHSDVLVSVFCKPHLVDGLVESSSSIVDFFTPVSPSCDLLVGFGRAVSDCGLTASIYDVMVIPSLRRMGIGKIIVKKILRILTNRDIYDIAALCSEDERLFFKACGFGGDILDSTTMMYTRTASSTIQEGEQTIICAGRKLLLVPPLIERPYKSSRQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04317 265 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 60 226 IPR039143 GO:0004343|GO:0006048
Trre6g04317 265 Pfam Acetyltransferase (GNAT) family 148 215 IPR000182 GO:0016747
Trre6g04317 265 Gene3D - 58 218 - -
Trre6g04317 265 CDD NAT_SF 148 195 - -
Trre6g04317 265 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 146 215 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04317 Trre-Chr6 46316684 46318481 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre6g04317 Acetyltransf_1 9.7e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04317 - - lang:109338220 305.449