Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04266 ATGCATAAATTTCATATTGTAGGCTTCTGCCGCCATTCCTATAGTGGGACCCATGTTTCGGTGGAGGATTCTGATGTAGCTTGGATAGATGGCGAGGTCTTGGAGGTTAATGGAGAAGAAATCGAAGTCCTTTGCACTTCAGGAAAGATAGTTGTTGTCAAACCTCTCCAGGATACAATATTTCAAGTTGTTGCTGCAAGTTTGCATCTTGGAAACATTGAATTTGTGAAACGAGAGGAGTTTGATTCATCTATGGCCAAAGATGAAAAATCCCGGTTCCACCTACAAACTGCAGCTGAGCTTTTTATGTGTGATGCTAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAACTGTTACTCGCGTTGAAACAATTACAAAATAG 384 0.4089 MHKFHIVGFCRHSYSGTHVSVEDSDVAWIDGEVLEVNGEEIEVLCTSGKIVVVKPLQDTIFQVVAASLHLGNIEFVKREEFDSSMAKDEKSRFHLQTAAELFMCDAKALEDSLCKRVTVTRVETITK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04266 127 PANTHER MYOSIN 55 127 - -
Trre6g04266 127 Pfam Myosin N-terminal SH3-like domain 15 54 IPR004009 GO:0003774|GO:0005524|GO:0016459
Trre6g04266 127 Gene3D Myosin VI head, motor domain, U50 subdomain 54 127 - -
Trre6g04266 127 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 14 63 IPR004009 GO:0003774|GO:0005524|GO:0016459
Trre6g04266 127 ProSiteProfiles Myosin motor domain profile. 1 127 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04266 127 Pfam Myosin head (motor domain) 53 126 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04266 127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 126 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04266 Trre-Chr6 45885859 45886437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04266 16 54 Myosins gene family AT1G04600 71.795 4.43e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04266 K10357 - gmx:100819463 120.168