Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04188 ATGGCTTCAGATCCAAAGCTTCACACTTTCGATGAGGTGTCAAAGCACAACAAGACCAAAGATTGCTGGCTTATTCTTTCTGGAAAGGTGTATGATGTCACCCCTTTTATGGAGGATCATCCCGGAGGTGACGAGGTTCTGTTGTCTGCAACAGGGAAGGATGCAACCAATGATTTTGAAGATGTTGGACACAGTGATTCTGCTAGAGAAATGATGGACAAATACTACATTGGTGAGATTGATCCATCAACTGTGCCGCTAAAGCGCTCCTACGTTCCACCTCAGCAATCTCAGTACAACCCTGACAAGACTTCGGAATTTGTGATCAAGATTTTGCAGTTCCTGGTGCCACTCCTGATATTGGGATTGGCCTTTGTTGTCCGAAACTACACCAAGAAAGAAGAGTAG 408 0.4485 MASDPKLHTFDEVSKHNKTKDCWLILSGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKRSYVPPQQSQYNPDKTSEFVIKILQFLVPLLILGLAFVVRNYTKKEE 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04188 135 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Trre6g04188 135 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Trre6g04188 135 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Trre6g04188 135 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Trre6g04188 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Trre6g04188 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Trre6g04188 135 PANTHER CYTOCHROME B5 4 132 - -
Trre6g04188 135 FunFam Cytochrome b5 type B 2 85 - -
Trre6g04188 135 SMART Cyt_b5_2 8 81 IPR001199 -
Trre6g04188 135 Gene3D - 1 86 IPR036400 -
Trre6g04188 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Trre6g04188 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 93 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04188 Trre-Chr6 44637877 44640156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04188 1 134 NADPH P450 reductases AT5G53560 79.851 4.57e-80 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04188 K23490 - sind:105166769 254.603