Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04175 ATGGCTTTTACATCAACTGCTCTACAATATTCATCCACATCATATTTAAAATCCTGGGTACCTTCTTTAGAAGGTAAGCTTGATCATAATTCATGGTGTGTCAGAGTGAGATCATACAAACCCACTTCTCAAAGATTACACCAACAGAATTTTGCAAGAGGGATAACCATCATGAGCGCAGCCACAAAACCAGCGAAATCACCAGCTGAAGAAGAATGGAAGGTTAAGAGAGAACTACTGCTGCAAAAAAGGGTAAAAAGTGTCGAACCAAAGGAAGCTCTGCGCCTTCAAAAAGAAAATAATTTTGTGATTCTTGATGTAAGGCCAGAAGCAGAGTTCAAGGAGGCTCATCCTCCAGATGCCATTAATGTGCAAGTATACAGGCTTATAAAAGAATGGACAGCCTGGGATATTGCCAGACGCGCTGCATTTGCATTTTTTGGTATTTTCTCTGGCACAGAAGAGAACCCCGAGTTTATCAAGTCTGTTGAGGAAAAATTAAATAAAAATGCAAAGATAATTGTAGCTTGCTCAGCAGGGGGAACAATGAAACCAACACAAAATCTGCCACAAGGTCAACAATCTAGGTCTCTAATAGCAGCTTACTTGCTGGTCCTAAATGGTTACACCAATGTCTTCCATCTAGAAGGTGGGCTTTACAAGTGGTTTAAAGAGGATCTGCCAAGTGTTTCAGACTCGGAGGAGTGA 708 0.4096 MAFTSTALQYSSTSYLKSWVPSLEGKLDHNSWCVRVRSYKPTSQRLHQQNFARGITIMSAATKPAKSPAEEEWKVKRELLLQKRVKSVEPKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQVYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFIKSVEEKLNKNAKIIVACSAGGTMKPTQNLPQGQQSRSLIAAYLLVLNGYTNVFHLEGGLYKWFKEDLPSVSDSEE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04175 235 Gene3D - 84 234 IPR036873 -
Trre6g04175 235 SMART rhod_4 88 228 IPR001763 -
Trre6g04175 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 31 232 IPR043186 -
Trre6g04175 235 CDD RHOD 92 222 - -
Trre6g04175 235 Pfam Rhodanese-like domain 90 223 IPR001763 -
Trre6g04175 235 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 72 230 - -
Trre6g04175 235 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 83 230 IPR036873 -
Trre6g04175 235 ProSiteProfiles Rhodanese domain profile. 98 231 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04175 Trre-Chr6 44527386 44529530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04175 55 228 Sulfurtransferasese or Rhodanese AT4G27700 78.161 1.27e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04175 - - gmx:100788147 384.8