Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04132 ATGGTAGAGGTGAGGGGAATAAATTTAAGTGGAAGACAAAAACAACAAATTCAATTGTCAAGGGCTGTTTACAATGACTCAGATATTTATTTTCTCGATGATCCTTTTAGTGTTGTTGATGCTCATACTGGAAGTCATTTGTTTAAGGAATGTCTTATGAAATTTTTATATGGTAAAACTTTTGTCTATGGTACACATCAACTGGAATTCTTGGAAGCTGCATATCTTAATTTGGTTATGAAAGATGGAAAGATAGTGGAGTCTGGAAGGTGA 273 0.337 MVEVRGINLSGRQKQQIQLSRAVYNDSDIYFLDDPFSVVDAHTGSHLFKECLMKFLYGKTFVYGTHQLEFLEAAYLNLVMKDGKIVESGR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04132 90 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 89 IPR027417 -
Trre6g04132 90 Gene3D - 1 90 IPR027417 -
Trre6g04132 90 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04132 Trre-Chr6 43885801 43886272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04132 5 89 Calmodulin-binding Proteins AT2G36910 35.294 4.31e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04132 - - mtr:25501707 156.377