Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04091 ATGTCCGAGTATGATTTTGCAGCTGAAGGAGATTTGTTCAAAGCACCTGAACCGATTATCGAAGAGTCAAGCATTGACGTGGATCCCATGACAGCCGCGATCTCAATGATATCTTGTGGCGAGGATGTAAAATCTGCAGATATTTCTATTCTTCAAAATGAACAACTTCTCAGCGATGTATTCTATGATTGCAGAAAGGATCTATTCGAAAAGACAGCAATGGAGTCACCGCTCTCTGAGATTCTTGAAATCAAGGTTCCACTATTGAGCATTGATGAGAACACAATTCAAGAAAACAAACAACTTCCTGACATAACATTACCGAAGAGCGTCAGCTCAGGATGTTTAAGCTCAATGGACTGGATGCATGGATCTGCTTCAATGAAGCCTGCTTTCCTCGGCGTCTCAGAAATAGACTTTGATGCAGTTTATGGCATGAGGAGATCATTTAGCGAAGGAGATATAAAGACTCTAGGCAACGGTAATATGAACACTGTCGAATCTCCCCGAGAGAGGCCCTTTTTTACTAGCAGCGAGGAGCGTTTACAAAAGCTCTCTAGATACAGAAACAAGAAGGCAAAAAGAAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTAGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCGAAGAATGAAGAATCTGAGGCAAATAGGGAATGA 696 0.421 MSEYDFAAEGDLFKAPEPIIEESSIDVDPMTAAISMISCGEDVKSADISILQNEQLLSDVFYDCRKDLFEKTAMESPLSEILEIKVPLLSIDENTIQENKQLPDITLPKSVSSGCLSSMDWMHGSASMKPAFLGVSEIDFDAVYGMRRSFSEGDIKTLGNGNMNTVESPRERPFFTSSEERLQKLSRYRNKKAKRNFGRKIKYACRKALADSQPRIRGRFAKNEESEANRE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04091 231 ProSiteProfiles CCT domain profile. 181 223 IPR010402 GO:0005515
Trre6g04091 231 Pfam CCT motif 181 223 IPR010402 GO:0005515
Trre6g04091 231 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 118 225 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04091 Trre-Chr6 43340311 43341310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04091 177 227 C2C2-CO-like Transcription Factor Family AT5G57660 52.941 2.22e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre6g04091 CCT 5.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04091 - - gmx:100814332 350.517