Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04070 ATGGAGGCAATCAGGATAAGCTGCGCTGGCTATCCCACCAGAAAAATGTTTGATGAATTCGTGGATCGATTCGGGCTTCTTGCACCTGAAGCTTTGGATCGTAGTTCTGATGAGGTCACTGCTTGCGAAAGTATTTTGGAGAAGGTTGGGCTTAAAGGATATCAGGTAACAATTACCATGTGGTCCATTGACTTTATTCTTTAG 204 0.4363 MEAIRISCAGYPTRKMFDEFVDRFGLLAPEALDRSSDEVTACESILEKVGLKGYQVTITMWSIDFIL 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04070 67 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 55 IPR027417 -
Trre6g04070 67 Gene3D - 10 62 - -
Trre6g04070 67 PANTHER MYOSIN 1 59 - -
Trre6g04070 67 Pfam Myosin head (motor domain) 1 55 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04070 67 ProSiteProfiles Myosin motor domain profile. 1 67 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04070 Trre-Chr6 43159086 43159379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04070 1 56 Myosins gene family AT1G04160 66.071 2.94e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04070 K10357 - cpap:110811579 104.76