Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04069 ATGGACGTTGTTGCAATAAGTTCTGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTACATCTTGGCAACATTGAATTTTCAAAAGGAAAGGGAATGGACTCATCTATGCCCAAAGATGAAAAATCTCTGTTTTACCTACAGACTGCGGCTGAACTTCTCATGTGTGATGCAAAGGCACTAGAAGATGCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATTGTAAAATGCCTGGATCCAGAAGCTGCTAGACTGAGCCGAGATGCTTTAGCTAAGATTGTGTACTCGAGGTTGTTTGACTGGCTAGTAGATAAAATTAATAATTCAATTGGTCAGGATCCTGACTCAAAGTCCTTAATCGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTCTGTATTAATTTGACCTATGAAAAGCTCCAGCAACATTTTAATCAGGTTTGTTAG 486 0.3909 MDVVAISSEEQEAIFRVVAAILHLGNIEFSKGKGMDSSMPKDEKSLFYLQTAAELLMCDAKALEDALCKRVIVTRDETIVKCLDPEAARLSRDALAKIVYSRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTYEKLQQHFNQVC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04069 161 FunFam Myosin 2 7 121 - -
Trre6g04069 161 ProSiteProfiles Myosin motor domain profile. 1 161 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04069 161 SMART MYSc_2a 1 161 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04069 161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 160 IPR027417 -
Trre6g04069 161 Pfam Myosin head (motor domain) 1 160 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04069 161 Gene3D Myosin VI head, motor domain, U50 subdomain 7 139 - -
Trre6g04069 161 Gene3D - 140 161 - -
Trre6g04069 161 PANTHER MYOSIN 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04069 Trre-Chr6 43157077 43158278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04069 1 159 Myosins gene family AT1G04160 82.390 1.62e-88 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04069 K10357 - tpra:123898663 295.434