Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04068 ATGATCAATGAGGGAATCAACCAGTCAATATTGGTTAGTGGTGAAAGTGGAGCTGGTAAAACAGAAAACACAAAGTTACTTATGCGCTACCTTGCTTACATGGGAGGGAGAGCTAATGTTGCTGAAGGTAGAACTATTGAGCAGAAAGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGAAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGCTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAAGGGAAGAATTTATGGAGCTGCTGGAAAGATCATGTGTTTGCCAGTTGTCGGATCCAAAGAGGAATTATCATTGTTTCTATTTGCTTTGTGCTGCACCTCGAGAGGTTGTTCAGAAGTACAATTTAGGAAACCCGAGAACCTTTCATTATCTAAATCAAACAAATTGCTATGA 426 0.3967 MINEGINQSILVSGESGAGKTENTKLLMRYLAYMGGRANVAEGRTIEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRIYGAAGKIMCLPVVGSKEELSLFLFALCCTSRGCSEVQFRKPENLSLSKSNKLL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04068 141 ProSiteProfiles Myosin motor domain profile. 1 141 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04068 141 Pfam Myosin head (motor domain) 1 92 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04068 141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 96 IPR027417 -
Trre6g04068 141 PRINTS Myosin heavy chain signature 55 82 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04068 141 PRINTS Myosin heavy chain signature 7 32 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04068 141 PANTHER MYOSIN 1 92 - -
Trre6g04068 141 Gene3D Kinesin motor domain 1 100 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04068 Trre-Chr6 43155960 43157027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04068 1 98 Myosins gene family AT5G43900 84.694 5.00e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04068 K10357 - tpra:123898663 174.481