Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04037 ATGTGTTTGTGTATATGCAGAGGCTATTACCGTTGCACTCATAGAAATGTTCAAGGTTGTTTGGCAACAAAACAAGTACAAAGATCCGACGAAGATCCAACTATCTTCGAGATCACTTACCGAGGAAACCATACATGCACAATGGCTTCATTAAATCCAATTGAAAACCAAGAAACAAATATTGTTAACACAAATCCTCAAAGCTTTGATCACGAGAAACCAAACGAACAACGTTTGAACAACCTACGAACAAGTCTAAGAGTCCAAACAGAGAACCTAGATTTCCTCAACCAATCATTTGCTCCTTTAATGCATTTACCATCAACTTCAGAACTCAAATTTGAAAACCATGTACTTGAAAGTAGCTATGCCGAAAACTTCAATTCTCCTTCGTATGTTTCACCTGCGAATTCCGGAATAGGTCACTTCTCGATGTCTCCAAGTCCAAGCGGGTTTTCAAATGTAGCAAGTGACATCATCCCTCTTGCTACTTCTGCTGCAAATACACCAACCACTACTTTAGATTTTCCATTTGACCAATTTCAATTTGATGGCCAGAACTTCACATTCGATCACTCTCCATTTTTTCCTTGA 594 0.3872 MCLCICRGYYRCTHRNVQGCLATKQVQRSDEDPTIFEITYRGNHTCTMASLNPIENQETNIVNTNPQSFDHEKPNEQRLNNLRTSLRVQTENLDFLNQSFAPLMHLPSTSELKFENHVLESSYAENFNSPSYVSPANSGIGHFSMSPSPSGFSNVASDIIPLATSAANTPTTTLDFPFDQFQFDGQNFTFDHSPFFP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04037 197 ProSiteProfiles WRKY domain profile. 7 49 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre6g04037 197 Gene3D WRKY domain 4 49 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre6g04037 197 SMART WRKY_cls 7 48 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre6g04037 197 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 149 IPR044810 GO:0003700
Trre6g04037 197 Pfam WRKY DNA -binding domain 7 46 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre6g04037 197 SUPERFAMILY WRKY DNA-binding domain 6 48 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04037 Trre-Chr6 42735366 42735959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04037 7 94 WRKY Transcription Factor Family AT4G23810 46.809 1.40e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre6g04037 WRKY 8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04037 - - psat:127082223 233.417