Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04000 ATGGAGACTAAGATTAGGACTTCAGAATTGGTTCCATTTATAATTATGGTGATTATGGAAGGGTGCACAATAGCACTAACTATATTTGCAAAAACTTCCATAACCAATGGAATGAGTCCATTTGTGTTCATTGTTTATACTAATGCTTTGGCTACTATAATTTTGTTTCCTTCTTCCTTTTTATTAAACCACCAAAACCAAAACAGAAAGGAGAAACCACTTTTTACTTTCTCTTTGTTTTTGAGATTGTTGCTCCTTGGTTTTACAGGAATAACAGTGACTCAAACACTTTTATTTTTGGGTCTAAGCTATAGTTCTCCAATACTTGTATGTGCCATGAGCCACTTAATCCCAACTTTTAATTTTCTCCTCAATATCATTAACAGGAAAGTAGAGTTGAATTTGAAAAACTCTAGTATCCAAGTACAAATGATTGGTATAATGGTATCAATAATGGGAGCAATAATAGCTGAATTCTTCAAAGGGCCACTTATAAGACCCTCTTCTCACCACCTTAAACAAACTAAGCAACTTTTTATCTTTTCCTCAACACCTGAATTTTGGGTTTTTGGTGGCATTTTACTAGCTGCTGCTTCTTTTTCAGTATCAATTGCCAACTTTATTCAGAAAGAAACTGTTAAGCAATATCCAGAACCAATGAAGATGGTTTCATATTATACCTTGCTTGGGATGATCCTAAGTGCAATAGTATCATGCATATTTGAGAGTGATGTAAATGCTTGGAAGCTAAAGCATAATATGGAGTTCATTCTCATTGTTTTAACGGCGATATTTGGGGGTGTGATTCGTCCGAATATTCAAGTTTGGTTGAGTAGAATGAAAGGTCCACTTTATGTGCCACAGTTCAAGCCCTTTGGTATTGCTTTTGCCACCACTTTTGGAGTTTGTTTTTTTCCTAACAGCCTTCATTATGGAAGTGTGATAGGAGCAAGTGTAATTGGAATCGGGTATTATACAATATTGTATGGAGAATTCAAAGGAGATGAAGATGAGAGAATTTATATTGAAAGCTCAGATTCTTTGGACAAGAAGATTCCTCTTTTGCAAGAAAAGATGGAACAAGTGTAG 1089 0.3499 METKIRTSELVPFIIMVIMEGCTIALTIFAKTSITNGMSPFVFIVYTNALATIILFPSSFLLNHQNQNRKEKPLFTFSLFLRLLLLGFTGITVTQTLLFLGLSYSSPILVCAMSHLIPTFNFLLNIINRKVELNLKNSSIQVQMIGIMVSIMGAIIAEFFKGPLIRPSSHHLKQTKQLFIFSSTPEFWVFGGILLAAASFSVSIANFIQKETVKQYPEPMKMVSYYTLLGMILSAIVSCIFESDVNAWKLKHNMEFILIVLTAIFGGVIRPNIQVWLSRMKGPLYVPQFKPFGIAFATTFGVCFFPNSLHYGSVIGASVIGIGYYTILYGEFKGDEDERIYIESSDSLDKKIPLLQEKMEQV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04000 362 PANTHER WAT1-RELATED PROTEIN 11 335 IPR030184 GO:0016020|GO:0022857
Trre6g04000 362 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020
Trre6g04000 362 Pfam EamA-like transporter family 14 156 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04000 Trre-Chr6 42202452 42204499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04000 1 361 Nodulin-like Gene Family AT1G70260 48.000 4.17e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04000 - - vum:124840741 523.857