Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03976 ATGTTCTTCATAGGTTATAATGAATTCTGCTTTGTGCTTTCTTCATCTGTTTTGTATTTGCAGCTGACTATGTGGGACTTGAGAATGAAAGGAAACGGTGGTTGTGTTCATCGGATTAGTGGTACCCCTGGTGATTCCTTATATTCTGTTTGCAGTTCTTCCACTGGTAATATTGCCGTGATTTTGATCTCATTCTCAACTTGGCTTGCCTGGTTTTTAGCTGGAAAATATCATGCTTACCTGAAATCGTGGATACCGTCTTCCTTGGACAGCTTTGGGCTTGCTTTGCAGTTTGGAATATCTGTCATGGTTATTGCCTGCCCTTGTGCTTTGGGTTTAGCCACGCCTACTGCTGTTATGGTTGGCACCGGTGTTGGTGCATCTCAGGGTGTATTGATCAAAGGGGGGCAAGCTTTGGAAAGTGCACATAAGGTAAATTGCATTGTTTTTGACAAGACGGGTACTCTCACTATTGGGAAACCGGTAATAGTAAATACCAAACTATTGACAAAAATGGTGCTCCGGGAATTCTATGAACTTGTGGCTGCAGCAGACGTAAGCACATGCCCCCCATTTCCTTGTAAAAGCCTTAGCCTCAGTAATAGTTATAGAGAACAATTGTTTTCCTATTAA 633 0.4234 MFFIGYNEFCFVLSSSVLYLQLTMWDLRMKGNGGCVHRISGTPGDSLYSVCSSSTGNIAVILISFSTWLAWFLAGKYHAYLKSWIPSSLDSFGLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVIVNTKLLTKMVLREFYELVAAADVSTCPPFPCKSLSLSNSYREQLFSY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03976 210 Pfam E1-E2 ATPase 58 127 - -
Trre6g03976 210 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 141 IPR023298 -
Trre6g03976 210 ProSitePatterns E1-E2 ATPases phosphorylation site. 151 157 IPR018303 -
Trre6g03976 210 Gene3D - 46 169 - -
Trre6g03976 210 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 59 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03976 Trre-Chr6 41956115 41957594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03976 60 206 Primary Pumps ATPases AT1G63440 76.871 1.06e-72 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03976 K17686 - gmx:100810141 239.58