Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03825 ATGGAGATTGGTTTGGATAGTAGTAAATTACAATTACAACCACAAAACTTGAAGCAAGAACAAAAGCTGCTGCAACAGCAGGAGCAACATTTTCATGTGTTGGCAGTAGATGATAGTGTCATTGATAGGAAGCTTCTAGAGAGACTCTTCAGAGGTTCTTCATGCAAAGTTACCTGTGTGGACTCTGGAGATAAGGCTTTGAAATATCTTGGACTGAATAATATTGATGAACAACTTAATAATAATAATTCTTCATCAACAAAATCTGTATTTCCTCAACCATTGCAGCTACAAGAGAGAATTAGCAAAGTGAATTTGATCATGACAGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAAAGAGTCAAGGGATCTTCTTGGAAAGATGTACCTGTTGTGATCATGTCATCAGAAAATGTACCTTCCAGAATTAGCATGTGCTTGGAAGAAGGTGCAGAAGAGTTTCTATTGAAACCTCTTCAATTATCGGATTTGCAGAAGCTTCAGCCATACTTTCTTAAATCACTAGACAATTCTTCTGATGAACAAGAATCTGCAAACAGTTCCACTTCTACCACAGATTTTGATGATGACGACGATGATCTCATCGACAACAATAATATTAGTATTAGTAAAAGGAAGGGTATATCTCCTGAACCTGCAGAGAGATCAAGGACCAAAATGAAAGGGTTGGCGCGTCAAATTAAGAGTTCTTGCATATTATTAATTAGTTTAACTATGATTATGTTTCTAATTATGCTTTCCTCCTAA 780 0.3628 MEIGLDSSKLQLQPQNLKQEQKLLQQQEQHFHVLAVDDSVIDRKLLERLFRGSSCKVTCVDSGDKALKYLGLNNIDEQLNNNNSSSTKSVFPQPLQLQERISKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLQLSDLQKLQPYFLKSLDNSSDEQESANSSTSTTDFDDDDDDLIDNNNISISKRKGISPEPAERSRTKMKGLARQIKSSCILLISLTMIMFLIMLSS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03825 259 SUPERFAMILY CheY-like 31 171 IPR011006 -
Trre6g03825 259 Gene3D - 32 215 - -
Trre6g03825 259 Pfam Response regulator receiver domain 102 170 IPR001789 GO:0000160
Trre6g03825 259 CDD REC_typeA_ARR 33 171 - -
Trre6g03825 259 MobiDBLite consensus disorder prediction 181 195 - -
Trre6g03825 259 MobiDBLite consensus disorder prediction 181 232 - -
Trre6g03825 259 ProSiteProfiles Response regulatory domain profile. 32 176 IPR001789 GO:0000160
Trre6g03825 259 SMART REC_2 31 172 IPR001789 GO:0000160
Trre6g03825 259 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 210 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03825 Trre-Chr6 39830045 39833162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03825 28 213 Response Regulator Gene Family AT3G57040 53.439 4.88e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre6g03825 Response_reg 5.5e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03825 K14492 - gmx:100801334 284.263