Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03812 ATGGCAGAGCGTGTGTTACTCACTCCTTCACTCACTTTACCATCTCGACCTTCACCAACCGCAACAATGGCTACTATTAGTGGCGGCGCCGCCGTTCGCATCATCCCTTCCGCTACCAGAGCCACCGTCTCACTCTCCTCTTCTTCCCGTTCCTTTTTCTCATTTCCATCCTCTTCAAATTCCGATTCCTCGCTCAACTGCTTGCGCTCCTCTCCTCGCATTTCTCATCTATTTCTTGACCAGCGAAGATCAGAAGTTCGTGTTTCGAGTGGACGATTTGGAACGGTTTCTGCTCCGAAGGCGTTCGCGTCTGATCCTGATCAGTTGAAGAGTGCTAGAGAAGATATAAAGGAGCTTCTCAAGACTAAGTTTTGTCATCCTCTTTTGATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGACGAGTTTCCACAAAGAGGCGGTGCCAATGGTAGCTTAAGATTTGAAGCTGAGTTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACATATGCTGACTTATTTCAGTTAGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCGAAAATTCCCATGAAATATGGAAGAGTAGATGTCACTGGACCTGAACAATGCCCAGAAGAAGGGAGACTTCCTGATGCAGGCCCCCCTTCACCTGCTGATCATTTGCGCAAAGTTTTCTACCGAATGGGGTTGAATGACAAGGAAATAGTTGCATTATCTGGTGCACACACACTGGGGCGGTCTAGACCTGAGCGTAGTGGCTGGGGCAAACCTGAGACTAAATACACGAAAGATGGGCCTGGAGCACCTGGGGGACAATCCTGGACTGCACAATGGTTAAAATTTGACAACTCTTACTTTAAGGACATCAAAGAAAAAAAGGATGAAGATCTATTGGTCTTGCCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTCAAGGTATATGCTGAGAAATATGTTGAAGATCAAGAAGCATTCTTTAAAGATTATGCCGAAGCACATGCCAAACTCAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGATGGCTCTCCAAATGCAGTGGGAGAGAAGTTTGTAGCAGCCAAGTACTCCTCTGGAAAGAAAGAGCTGTCTGATGCTATGAGGCAGAAGATACGGGCTGAATATGAGGCGGTTGGCGGAAGCCCAGAGAAGGCTCTAAAGTCAAACTATTTTCTAAACATCATCATTGTTATTGCTGTTTTGGCTATTTTGACATCCCTGCTTGGAAACTAA 1335 0.4584 MAERVLLTPSLTLPSRPSPTATMATISGGAAVRIIPSATRATVSLSSSSRSFFSFPSSSNSDSSLNCLRSSPRISHLFLDQRRSEVRVSSGRFGTVSAPKAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIDEFPQRGGANGSLRFEAELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPADHLRKVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFDDPSFKVYAEKYVEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGSPNAVGEKFVAAKYSSGKKELSDAMRQKIRAEYEAVGGSPEKALKSNYFLNIIIVIAVLAILTSLLGN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03812 444 Gene3D Peroxidase, domain 2 234 357 - -
Trre6g03812 444 SUPERFAMILY Heme-dependent peroxidases 104 365 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Haem peroxidase superfamily signature 126 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Haem peroxidase superfamily signature 206 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Haem peroxidase superfamily signature 188 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Haem peroxidase superfamily signature 296 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 CDD ascorbate_peroxidase 97 367 - -
Trre6g03812 444 ProSitePatterns Peroxidases proximal heme-ligand signature. 256 266 IPR019793 -
Trre6g03812 444 MobiDBLite consensus disorder prediction 263 295 - -
Trre6g03812 444 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 95 366 IPR044831 GO:0004601|GO:0034599
Trre6g03812 444 Gene3D - 112 365 - -
Trre6g03812 444 PRINTS Plant ascorbate peroxidase signature 325 349 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Plant ascorbate peroxidase signature 105 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Plant ascorbate peroxidase signature 187 205 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Plant ascorbate peroxidase signature 206 218 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 PRINTS Plant ascorbate peroxidase signature 126 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 FunFam L-ascorbate peroxidase T, chloroplastic 234 357 - -
Trre6g03812 444 Pfam Peroxidase 113 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g03812 444 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 112 236 - -
Trre6g03812 444 ProSiteProfiles Plant heme peroxidase family profile. 129 383 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03812 Trre-Chr6 39706023 39711711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03812 113 362 Peroxidase AT2G22420 28.058 1.34e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03812 K00434 - csav:115707840 675.626