Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03460 ATGGGAACAACATTTTTGGCACTAAGTGTGGCAATATCATTTACAAAGATAATTCTGATCTCAATTCGACCAAGCACGGAAACTTTAGGAAAACTTCCTGGAACTGATATGTTCTGTGATGTTGATCAGTATCCTATGGCAATTCAGATTCCAGGGGTTATGATAATACGTATGAAATCTGCATTACTTTGCTTTGCAAATGCCAATTTCGTTAAAGAAAGGATCATCAAATGGGTCACTCAGGAAGAATCAGAAGATGACAAGGAAAATTCAAAAAGCTCCATTCAACTTGTTATTCTTGACACCTCGAATTTGGCGAACATTGACACCTCTGGAATTGCTTCTATGGAGGAACTATACAAGTGTTTGTCTTCACATGGGAAGCAGTTGGCCATTGCAAATCCAAGATGGCAAGTGATTCACAAGCTAAAGGTGTCAAACTTTGTCAACAAAATAGGTGGCAGAGTCTATCTAACTGTTGAAGAAGCTATTGCTGCAAACAGCAAGAGTAATCAGTTCTAG 522 0.3851 MGTTFLALSVAISFTKIILISIRPSTETLGKLPGTDMFCDVDQYPMAIQIPGVMIIRMKSALLCFANANFVKERIIKWVTQEESEDDKENSKSSIQLVILDTSNLANIDTSGIASMEELYKCLSSHGKQLAIANPRWQVIHKLKVSNFVNKIGGRVYLTVEEAIAANSKSNQF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03460 173 Gene3D STAS domain 23 170 IPR036513 -
Trre6g03460 173 CDD STAS_SulP_like_sulfate_transporter 44 153 - -
Trre6g03460 173 SUPERFAMILY SpoIIaa-like 48 166 IPR036513 -
Trre6g03460 173 ProSiteProfiles STAS domain profile. 63 167 IPR002645 -
Trre6g03460 173 FunFam Sulfate transporter 31 23 170 - -
Trre6g03460 173 Pfam STAS domain 44 163 IPR002645 -
Trre6g03460 173 PANTHER SULFATE TRANSPORTER 6 167 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03460 Trre-Chr6 34562416 34564461 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03460 6 166 Inorganic Solute Cotransporters AT5G10180 57.407 8.74e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03460 K17469 - gmx:100781327 265.388