Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03459 ATGACTTCTTCAACAGTTGAACCCTGCAAATCTGAGGATTTTCAGGTTGATATTGAGAAGAATCAGCAGGATGTAAGGTCTCAGTGGGTGCTTAATGCACCTGAGCCCCCAAGTCCTTGGCATGTGACTATAGATTCTGTGAAGAAAACAGTTTCTAACTACAGAGAGAAAGTTTCTTCTCTATGTGATCAACCATGTAGCACACTCTTTTCAGCTTTGCAGGTTGTTTTTCCTATTCTTGTTTGGGGAAGAAACTACACTGCTGCTAAATTTAGGAAAGATATTCTTGCTGGTCTCACTATTGCTAGTCTTTGTATTCCACAGAGCATAGGGTATGCAACATTAGCAAACCTTGCTCCTCAATATGGACTTTATACGAGTGTTGTACCGCCGCTTATCTATGCTGTAATGGGAACTTCAAGAGAGATAGCAATTGGTCCAGTGGCAGTGGTTTCCTTGCTGTTATCCTCAATGGTTCAAAAATTAGTAGACCCATCTACTGATCCAATTGGTTATACAAAGCTTATTTTTCTTGCTACTCTCTTTGCTGGTATCTTCCAAACCGCGTTTGGATTGTTCAGGTTGGGGTTTCTTGTGGATTTTCTGTCACATGCTGCAATTGTTGGATTTGTAGCAGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACTCATTTTACAACAAAAACAGACATAATCTCTGTCATGAAAGCTGTTTGTGAAGCATTTCATAACCCCTGGAACCCTCACAATTTCTTCCTCGGAGCTTCATTCTTGGTGTTCATCCTTACAACTAGATTTGTGGGTAAAAGGAAGAAGAAATTGTTCTGGTTGGCATCAATTTCACCACTAGTATCAGTTATACTATCGACTCTGGTTGTTTTTCTAACACGAGCCGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGGGGACTCAATCCAATCTCCATCAATCAGCTAGACTTTAACAGTCCCCATGTTGTAGATGTCGCAAAAATTGGACTTATCGTTGCTGTTGTTGCACTTACCGAATCTGTTGCTGTTGGACGATCTTTTGCATCCATAAAAGGATACCAACTTGATGGAAACAAAGAAATGATGTCAATAGGCTTCACAAACATCATTGGATCTCTCACATCTTGTTATGTTGCAACTGGTTCTTTCTCGCGCACCGCTGTTAATTATGCGGCTGGATGTGAAAGCTTAATATCCAACATTGTGATGGCCATTACAGTGATGATATCACTGCAGTTTTTGACAAATCTATTGTATTATACACCAATTGCTATAATTGCATCAGTGATCATCTCAGCTCTACCAGGACTCATTGACATAACTGAAGCTTACAAAATTTGGAAGGTTGATAAACTTGACTTTCTTGCTTGCATTGGTGCCTTCTTTGGTGTACTATTTGCTTCTGTGGAGATTGGTCTTCTAGTAGCGGTAAAATCATTCACACTTCTCAGTTTATCACATCTCTTCACTAATTAA 1515 0.3967 MTSSTVEPCKSEDFQVDIEKNQQDVRSQWVLNAPEPPSPWHVTIDSVKKTVSNYREKVSSLCDQPCSTLFSALQVVFPILVWGRNYTAAKFRKDILAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLVDPSTDPIGYTKLIFLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVMKAVCEAFHNPWNPHNFFLGASFLVFILTTRFVGKRKKKLFWLASISPLVSVILSTLVVFLTRADKNGVKIVKHVKGGLNPISINQLDFNSPHVVDVAKIGLIVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAITVMISLQFLTNLLYYTPIAIIASVIISALPGLIDITEAYKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVKSFTLLSLSHLFTN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03459 504 NCBIfam sulfate permease 78 491 IPR001902 GO:0016020|GO:0055085
Trre6g03459 504 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Trre6g03459 504 Pfam Sulfate permease family 91 471 IPR011547 GO:0016020
Trre6g03459 504 PANTHER SULFATE TRANSPORTER 56 491 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03459 Trre-Chr6 34543538 34547689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03459 20 490 Inorganic Solute Cotransporters AT5G10180 70.127 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03459 K17469 - gmx:100817831 815.453