Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03457 ATGGATCAAAAATTGATAGACCCATCTACTGATCCAATTGGTTATACAAAGCTTATTTTTCTTGCTACTCTCTTTGCTGGTATCTTCCAAACCGCGTTTGGATTGTTCAGGTTGGGGTTTCTTGTGGATTTTCTGTCACATGCTGCAATTGTTGGATTTGTAGCAGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACTCATTTTACAACAAAAACAGACATAATCTCTGTCATGAAAGCTGTTTGGGAAGCATTTCATAACCCCTGGAACCCTCACAATTTCTTCCTCGGAGCTTCATTCTTGGTGTTCATCCTTACAACTAGATTTGTGGGTAAAAGGAAGAAGAAATTGTTCTGGTTGGCATCAATTTCACCACTAGTATCAGTTATACTGTTGACTCTGGTTGTTTTTCTAACACGAGCCGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGGGGACTCAATCCAATCTCCATCAATCAGCTAGACTTTAACAGTCCCCATGTTGTAGATGTCGCGAAAATTGGACTTATCGTTGCTGTTGTTGCACTTACCGAATCTGTTGCTGTTGGACGATCTTTTGCATCCATAAAAGGATACCAACTTGATGGAAACAAAGAAATGATGTCAATAGGCTTCACAAACATCATTGGATCTCTCACATCTTGTTATGTTGCAACTGGTTCTTTCTCGCGCACCGCTGTTAATTACGCGGCTGGATGTGAAAGCTTAATATCCAACATTGTGATGGCCATTACAGTGATGATATCACTGCAGTTTTTGACAAATCTGTTGTATTATACACCAATTGCTATAATTGCATCAGTGATCATCTCAGCTCTACCAGGACTCATAGACATAACTGAAGCTTACAAAATTTGGAAGGTTGATAAACTTGACTTTCTAGCTTGCATTGGTGCCTTCTTTGGTGTACTATTTGCTTCTGTGGAGATTGGTCTTCTAGTAGCGGTGGCAATATCATTTACAAAGATAATTCTGATCTCAATTCGACCAAGCACGGAAACTTTAGGAAAACTTCCTGGAACTGATATGTTCTGTGATGTTGATCAGTATCCTATGGCAATTCAGATTCCAGGGGTTATGATAATACGTATGAAATCTGCATTACTTTGCTTTGCAAATGCCAATTTCGTTAAAGAAAGGATCATCAAATGGGTCACTCAGGAAGAATCAGAAGATGACAAGGAAAATTCAAAAAGCTCCATTCAACTTGTTATTCTTGACACCTCGAATTTGGCGAACATTGACACCTCTGGAATTGCTTCTATGGAGGAACTATACAAGTGTTTGTCTTCACATGGGAAGCAGTTGGCCATTGCAAATCCAAGATGGCAAGTGATTCACAAGCTAAAGGTGTCAAACTTTGTCAACAAAATAGGTGGCAGAGTCTATCTAACTGTTGAAGAAGCTATTGCTGCAAACAGCAAGAGTAATCAGTTCTAG 1491 0.393 MDQKLIDPSTDPIGYTKLIFLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVMKAVWEAFHNPWNPHNFFLGASFLVFILTTRFVGKRKKKLFWLASISPLVSVILLTLVVFLTRADKNGVKIVKHVKGGLNPISINQLDFNSPHVVDVAKIGLIVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAITVMISLQFLTNLLYYTPIAIIASVIISALPGLIDITEAYKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVAISFTKIILISIRPSTETLGKLPGTDMFCDVDQYPMAIQIPGVMIIRMKSALLCFANANFVKERIIKWVTQEESEDDKENSKSSIQLVILDTSNLANIDTSGIASMEELYKCLSSHGKQLAIANPRWQVIHKLKVSNFVNKIGGRVYLTVEEAIAANSKSNQF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03457 496 ProSiteProfiles STAS domain profile. 386 490 IPR002645 -
Trre6g03457 496 FunFam Sulfate transporter 31 346 493 - -
Trre6g03457 496 PANTHER SULFATE TRANSPORTER 14 490 IPR001902 GO:0016020|GO:0055085
Trre6g03457 496 Pfam STAS domain 367 486 IPR002645 -
Trre6g03457 496 NCBIfam sulfate permease 4 478 IPR001902 GO:0016020|GO:0055085
Trre6g03457 496 Pfam Sulfate permease family 10 314 IPR011547 GO:0016020
Trre6g03457 496 SUPERFAMILY SpoIIaa-like 371 489 IPR036513 -
Trre6g03457 496 CDD STAS_SulP_like_sulfate_transporter 367 476 - -
Trre6g03457 496 Gene3D STAS domain 346 493 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03457 Trre-Chr6 34500881 34510140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03457 1 489 Inorganic Solute Cotransporters AT5G10180 68.163 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03457 K17469 - gmx:100781327 830.091