Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03405 ATGTCTCGCAGCTCTCAAACATGCAACAATGGAAGAGAACACAGCATTACAATTTTCGGTGTTCGACTAACTAGAACTAATGACGACGACGACAACAACATCCAACTCTCTGAATGCCAACAACCTCTACCTCAAGTTTCCACCTCCACTGGTGCCAGTTATGTCTCCGACAAGGTCGTTCATGCCCCGGACCGGTCCCGCAAATGCAAACGAGGTGTTCCTTGGACGGAAGAAGAACAAAGGTTGTTCTTGAAAGGGTTGAAAGTGATTGGTAACGGTCATTGGAAAAGAATTTCTAGCAACTTTGTTAAAACTCGGACAGCAACTCAGGTTGCAAGTCATGCTCAGAAACATTTTTTCCACCGTCCTAACCAGAACCGCCGCCGCAGAAAACCTAGTGTCTTTGATCTTACCATTGATAAGGTGATAGAATCTTCAACTATTATGGAAAATGAGCAGATTCGGCAAGAAAATGTGGTGCCCCTACCTCCACCAACCCCCACCGCATATCCATCCACACACAATGGCAGTACTCCCGACGGCCCTTTACCGATCAGTCTTGGTCTAGTAGCATTACCGGTGTGGCCTCTTTCTTGGTTCGACTTGAATGGCAATGGATCTTCTTCTTCTTCCCCTAAGACTTTTCCATTGTCATTGAAGCTATAA 666 0.4595 MSRSSQTCNNGREHSITIFGVRLTRTNDDDDNNIQLSECQQPLPQVSTSTGASYVSDKVVHAPDRSRKCKRGVPWTEEEQRLFLKGLKVIGNGHWKRISSNFVKTRTATQVASHAQKHFFHRPNQNRRRRKPSVFDLTIDKVIESSTIMENEQIRQENVVPLPPPTPTAYPSTHNGSTPDGPLPISLGLVALPVWPLSWFDLNGNGSSSSSPKTFPLSLKL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03405 221 Pfam Myb-like DNA-binding domain 74 118 IPR001005 -
Trre6g03405 221 CDD SANT 74 119 IPR001005 -
Trre6g03405 221 Gene3D - 75 122 - -
Trre6g03405 221 SUPERFAMILY Homeodomain-like 69 121 IPR009057 -
Trre6g03405 221 NCBIfam myb-like DNA-binding domain, SHAQKYF class 70 121 IPR006447 GO:0003677
Trre6g03405 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 125 IPR017930 -
Trre6g03405 221 ProSiteProfiles SANT domain profile. 70 123 IPR017884 -
Trre6g03405 221 SMART sant 71 121 IPR001005 -
Trre6g03405 221 ProSiteProfiles Myb-like domain profile. 74 119 IPR001005 -
Trre6g03405 221 MobiDBLite consensus disorder prediction 159 180 - -
Trre6g03405 221 PANTHER TRANSCRIPTION FACTOR KUA1 3 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03405 Trre-Chr6 33664909 33666609 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre6g03405 Myb_DNA-binding 1.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03405 - - tpra:123909419 208.379