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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trre6g03317
ATGGAAGAACGTTATGAGATTATTAAAGGTATTGGGTCAGGAAATTTTGGAGTAGCAAAGCTTGTTAGGGAGAGACAGAGTGGTAAACTATATGCTGTCAAAATCATTGAGAGAGGCCTTAAGATTGATGAACATGTGCAAAGGGAGATTATAAATCATAGATCCTTGAAGCATCCTAATATCATTAGATTTAAGGAGGTTTTATGTACTCCAGCTCATCTAGCTATAGTGATGGAGTATGCAGCAGGTGGAGAACTATTTGAAAGAATATGTAGTGCCGGTAGATTCTGTGAAGACGAGGCAAGATATTTCTTCCAGCAGTTGATTTCTGGGGTCAGCTATTGTCATTCAATGGAAATTTGCCATAGAGATCTTAAGCTTGAAAACACACTTTTAGATGGAAGTTCTTCACCGCAACTCAAAATATGTGACTTTGGTTACTCCAAGTCTTCTGTTCTGCATTCTCAGCCTAAATCAACAGTGGGAACTCCAGCATATATTGCACCAGAGGTCTTGTCAAGAAGAGAGTATGATGGAAAGGTTGCTGATGTTTGGTCTTGTGGGGTTACCTTGTATGTGATGCTAGTTGGTGGTTATCCTTTTGAAGATCCAGATGATCCAAGAAATTTTAGAAAGACAATTGAGAGAATCCTAAAGGTCCACTATTCAATTCCTGATTATGTTCGTGTCTCCAAAGATTGTAGACACCTTTTATCTCAAATATTTGTGGCCAACCCCGAAAAGAGAATCACTATCCCAGAAATTAAAAAGCACCCCTGGTTCCTTAATAAATTGCCAATGGAATTTGTGGAGGAAGGAAAAAATAATAAGTTAGAAAATGATGTGAATGGTGTGGTTGATTCATCTCAAAGTATTGAGGAAATACAATCCATAATTCAAGAGGCACGGAAGCCAGGTGAAGGCCCAAAAATTGATGGACAATTTGTTGGAGGAGCCATGGATTTTGATGAGATGGATGCAGATGATGATTTTGATGATGATATAGAAACAAGTGGAGATTTTGATTTTGTTTGTGATATGTGA
1044
0.3803
MEERYEIIKGIGSGNFGVAKLVRERQSGKLYAVKIIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLCTPAHLAIVMEYAAGGELFERICSAGRFCEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSSPQLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIERILKVHYSIPDYVRVSKDCRHLLSQIFVANPEKRITIPEIKKHPWFLNKLPMEFVEEGKNNKLENDVNGVVDSSQSIEEIQSIIQEARKPGEGPKIDGQFVGGAMDFDEMDADDDFDDDIETSGDFDFVCDM
347
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trre6g03317
347
PANTHER
SERINE/THREONINE KINASE
3
287
-
-
Trre6g03317
347
FunFam
Serine/threonine-protein kinase SRK2E
81
269
-
-
Trre6g03317
347
ProSiteProfiles
Protein kinase domain profile.
5
261
IPR000719
GO:0004672|GO:0005524|GO:0006468
Trre6g03317
347
SUPERFAMILY
Protein kinase-like (PK-like)
3
271
IPR011009
-
Trre6g03317
347
Gene3D
Transferase(Phosphotransferase) domain 1
81
268
-
-
Trre6g03317
347
Pfam
Protein kinase domain
5
261
IPR000719
GO:0004672|GO:0005524|GO:0006468
Trre6g03317
347
SMART
serkin_6
5
261
IPR000719
GO:0004672|GO:0005524|GO:0006468
Trre6g03317
347
ProSitePatterns
Serine/Threonine protein kinases active-site signature.
120
132
IPR008271
GO:0004672|GO:0006468
Trre6g03317
347
ProSitePatterns
Protein kinases ATP-binding region signature.
11
34
IPR017441
GO:0005524
Trre6g03317
347
Gene3D
Phosphorylase Kinase; domain 1
1
80
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trre6g03317
Trre-Chr6
31891505
31894949
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trre6g03317
4
271
CBL-interacting serine-threonine protein kinases
AT4G24400
42.446
3.04e-68
218
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
PK
CAMK_OST1L
Trre6g03317
Pkinase
4.7e-71
CL0016
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trre6g03317
K14498
-
gmx:100807981
555.058
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