Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03267 ATGTTACATACAGGTGAAATTCCATTTTCCCTCTTCAACATCTCTTCTTTGATGGAGATTGTACTTGACAAGAACAGCTTAAATGGAAGTCTCCCACATAAGATGTGTCGTCAATTTTCTCAACTTCAAACTTTTTCTATAGACCATAATGATTATGGAGGAATCATTCCACGATCGATTGGAAACTGCACATCTTTACAATATTTCAGTTCAAGTAATAATTTTTTTATAGGTTCGATACCAATGGAGATTGGTCATCTCAATCAACTTCAAATTTTGAAATTGGGAAATAACAGCTTGAGTGGATCTATTCCCTCAAAACTCCTCAACATTTCAACATTGGAAGTTTTATTTCTTCAACAAAATTCCCTCTCAGGCATGCTTCCATCAAATATGGGACCTAACCTCAAAAATCTATACTTATTTCTAAACAACTTTGTTGGAAAAATTCCAGACAGTATATCCAATGCTTCAAATCTCGTTCAACTTGCCTTGAGTTATAATGGATTTAGTGGAATTATACCCTCTTTTAGAGATTTAAGAGTCATCCAATTCCTCGGCATAGAGGGCAATAATTTGACATTAAATGATGATTCTCTTGAAATAAACTTCCTTACTTCACTTACTAGTAGCAGATATCTTGTACGCCTTGACGTATCAGAGAATAGGTTATCAAAACTTCCTAAGTCCATTGGAAACTTAACAATTGAAAAATTTTGGGCAGATTCTTGTGGAATTAATGGAAATATTCCACTAGAAATCGGAAACATGAGCAACCTCATTCAATTATCTCTTAGTGGGAATAATTTATATGGACCAATACCTAGTACAATTAAAGGGTCACATAAGCTTCAATTTTTGAATCTTGACTACAATAGACTCCAAGGATCTATAGTTCACGAGCTTTGCGAAATTAGGAGTTTGAGTGAATTGTATTTAACAAACAATAAGTTTTATGGAGAGTTACCAACATGTTTGGGAAATATGACTTCACTTAGAAAGTTTCACATAGGATCTAATAGGTTGTCCTCTAAGATACCTTCCTCCTTTTGGAATCTCAAAGATATCTTAGAGGTAAGCATATCCTCCAATGCTTTAATTGGAAATCTTCCACCTGAGATTCAGAATTTGAGAGCTCTTGTAAAATTAGATTTGTCAAGAAATCAACTTTCAAGCAACATTCCAACAACCATAAGTTTCTTGATAAATTTAGAAACTCTATCCTTAGCATATAACAAATTGGGAGGGCCTATCCCAACATCACTTGGTGAAATGTTAAGTCTGAGTTTCTTGGATTTGTCTCAAAATCTTATAACTGGTGTGATTCCAAAATCATTAGAGTCGCTTTCGTATCTTAAATACATCAATCTATCGAACAATAGATTGCAAGGAGAGATTCCTGATGGAGGACCTTTCAAAAGTTTCACTGCTCAATCTTTCATGCATAATGACGCGCTTTGTGGCAATCCTCGCTTACATGTATCTCTATGTATGAAAAAGTCAAAGAAAAAGATGCTACTAATCAAATGTGTATTGCCAATAATTGTTGTGTTAGGCATTTTGGTTGTTGCATGCATAATACTTGGAATTCATAAAAAGAAAAAGGTTGAAAATCCCCTTAAAAGTGATTTGTCAGCTACTTTAGGGGTTCCAAGAAGAATATCCTACTATGATCTTGTGAAAGCAACTAATGGATTCAGTGAAAGTAATTTACTTGGAAGAGGTGGCTTTGGATCTGTGTATCAAGGAATGCTTTCTAGTGGGAAGATGGTGGCAATTAAAGTACTTGACTTGACAATGGAAGCAACATCAAGAAGCTTTGATGCAGAATGTAATGCAATGCGCAACCTTCGACATCGAAATCTTGTTCAAGTTATTAGTAGTTGTTCAAATGATGATTTCAAATCTTTGGTGATGGAGTTTATGTCAAATGGAAGTGTGGAAAAATGGTTATACTCAGAGAACTCTTGTTTGGATTTCTTACAAAGGTTGAATATAATGATTGATGTGGCATCAGCATTGGAGTATCTACATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTTTTACTAGATGAAGATATGGTTGCGCATGTCAGTGATTTTGGCATTTCTAAGCTCTTGGATGAAGGACAATCAAAAACTCACACCCAAACTTTAGCTACTCTTGGTTATATTGCACCAGAGTATGGATCTAAAGGGGTCATTTCAGTTAAAGGAGATGTGTACAGTTATGGGATAATGCTAATGGAAATGTTCACAGGAAAGAAGCCAACAAATGAAATGTTTTCAGAAGAATTAACCTTGAAAACTTGGATTAGTGAATCAATGGTCAATTCAGTTATGGAAGTTGTGGATTACAATTTAGGATCACAACATGAGAAAGAACTTCATGAAATTTTAGCTTTAGCTCTGAGTTGTTGTGCAGGTTCACCTGAGGCAAGAATTAAAATGACAGATGTAACTGCATCATTGAGCAAAATCAAGACCTTATTCTTGCGGTGA 2523 0.3496 MLHTGEIPFSLFNISSLMEIVLDKNSLNGSLPHKMCRQFSQLQTFSIDHNDYGGIIPRSIGNCTSLQYFSSSNNFFIGSIPMEIGHLNQLQILKLGNNSLSGSIPSKLLNISTLEVLFLQQNSLSGMLPSNMGPNLKNLYLFLNNFVGKIPDSISNASNLVQLALSYNGFSGIIPSFRDLRVIQFLGIEGNNLTLNDDSLEINFLTSLTSSRYLVRLDVSENRLSKLPKSIGNLTIEKFWADSCGINGNIPLEIGNMSNLIQLSLSGNNLYGPIPSTIKGSHKLQFLNLDYNRLQGSIVHELCEIRSLSELYLTNNKFYGELPTCLGNMTSLRKFHIGSNRLSSKIPSSFWNLKDILEVSISSNALIGNLPPEIQNLRALVKLDLSRNQLSSNIPTTISFLINLETLSLAYNKLGGPIPTSLGEMLSLSFLDLSQNLITGVIPKSLESLSYLKYINLSNNRLQGEIPDGGPFKSFTAQSFMHNDALCGNPRLHVSLCMKKSKKKMLLIKCVLPIIVVLGILVVACIILGIHKKKKVENPLKSDLSATLGVPRRISYYDLVKATNGFSESNLLGRGGFGSVYQGMLSSGKMVAIKVLDLTMEATSRSFDAECNAMRNLRHRNLVQVISSCSNDDFKSLVMEFMSNGSVEKWLYSENSCLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDEDMVAHVSDFGISKLLDEGQSKTHTQTLATLGYIAPEYGSKGVISVKGDVYSYGIMLMEMFTGKKPTNEMFSEELTLKTWISESMVNSVMEVVDYNLGSQHEKELHEILALALSCCAGSPEARIKMTDVTASLSKIKTLFLR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03267 840 SUPERFAMILY L domain-like 242 490 - -
Trre6g03267 840 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 642 840 - -
Trre6g03267 840 ProSiteProfiles Protein kinase domain profile. 566 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g03267 840 SUPERFAMILY Protein kinase-like (PK-like) 547 831 IPR011009 -
Trre6g03267 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 685 697 IPR008271 GO:0004672|GO:0006468
Trre6g03267 840 Gene3D Phosphorylase Kinase; domain 1 549 641 - -
Trre6g03267 840 SUPERFAMILY L domain-like 8 318 - -
Trre6g03267 840 FunFam Serine-threonine protein kinase plant-type 547 641 - -
Trre6g03267 840 Pfam Leucine rich repeat 403 462 IPR001611 GO:0005515
Trre6g03267 840 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 36 128 - -
Trre6g03267 840 ProSitePatterns Protein kinases ATP-binding region signature. 572 594 IPR017441 GO:0005524
Trre6g03267 840 Pfam Protein kinase domain 567 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g03267 840 SMART serkin_6 566 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g03267 840 Gene3D Ribonuclease Inhibitor 198 505 IPR032675 -
Trre6g03267 840 Gene3D Ribonuclease Inhibitor 2 197 IPR032675 -
Trre6g03267 840 SMART LRR_typ_2 208 234 IPR003591 -
Trre6g03267 840 SMART LRR_typ_2 425 448 IPR003591 -
Trre6g03267 840 SMART LRR_typ_2 377 401 IPR003591 -
Trre6g03267 840 SMART LRR_typ_2 87 111 IPR003591 -
Trre6g03267 840 SMART LRR_typ_2 449 473 IPR003591 -
Trre6g03267 840 SMART LRR_typ_2 329 352 IPR003591 -
Trre6g03267 840 PANTHER OS04G0122200 PROTEIN 3 133 - -
Trre6g03267 840 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 207 501 - -
Trre6g03267 840 Gene3D Transferase(Phosphotransferase) domain 1 642 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03267 Trre-Chr6 30818861 30822728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03267 5 840 Receptor kinase-like Gene Family AT3G47570 37.528 9.67e-176 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre6g03267 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03267 - K13420 mtr:25485995 1098.96