Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03251 ATGGCGGTTCTGTTACCTTCCACACCAACTATACTCTCTACTCCGTTCGCAAACCGAACCACAACTCATCTTCCACTTCGCCATCACTCCCACACCTTCTCACCCTCCACCAAACGCTTTCTTCGCGGTTCTCTTTCCGTTGCCCGCTTCGGTTTTCAACCCGGCTTTTTACCCGAACCGGATGACGCCCAATTCGTTATCAAAGAATTGTTTAACCGAGCGGAGGGTTTTCTTTACACAATTGCCGATGCCACCGTTTTGTCTTCCGATACGGTGGTAACCACCGCCATCACCACCGCCAAGCAAAACAACAATTTGCTTTCATTAATTAGCGATTTCGTCGAGACTGTTCTCAAGGTACTTACGTATGGCCTTTCTACTTTGCATGTGCCGAATGCTTATGGTTTTTCAATTGTAATGCTTGCAGTTCTTGTAAATGCTGCCATATTTCCGTTGACAAGAAAACAGGTAGAATCTGACATGGCAATGCGATCTTTGAAACCTCAATTAGAGGCCATCGTAAAACAGTATTCCGGGAATTCCAAAAAAAAAAACACAAAACAGTATGTCGAGGATCTGGAGAGAATTAAACTGGAAACTGATCGGTTATATAAATTAGCCAACATTGATCCTCTATCAGGATTCCGGCCTGTTCTCTTAACAACACCAGTGTGGATTGGGCTATATCAAGCCTTTTCAAAGATGGCAGATGGGGGACCTCTTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCTCAGCAAAATGGAAATGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCTCCTTGGATGGCCAGATACATTGGCTTACCTTGTCTTGCCTGTTTTGTTGGTTGTCTCTCGATACATTTCTCTCCAAATAATACCATCATCAGAGGGACTACCAGTGTATACCAAAACTCTAAAGAAAGGAGATTGGCCCCTTGGGAAATCCTTGAACTTTGTGATAAAGGTTAATATTCCCAAAGTGAAGAGTTCTCAAAAGGCCTTCGATGTCAATTTCCAGGGTACTGATCCCAATGTGGAGAGTTCCAAAGTCTTAGACAATATCCTTCTTTCATTAGTGTTTGGTTGTTTTGCTCTTTTAGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAGATAATATATTGAACACTTTACAGCAAATATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTCTGGGACAAGTTCTAGATGATAATGTGAAAAATGACCCAATGCAGATTTAG 1284 0.4245 MAVLLPSTPTILSTPFANRTTTHLPLRHHSHTFSPSTKRFLRGSLSVARFGFQPGFLPEPDDAQFVIKELFNRAEGFLYTIADATVLSSDTVVTTAITTAKQNNNLLSLISDFVETVLKVLTYGLSTLHVPNAYGFSIVMLAVLVNAAIFPLTRKQVESDMAMRSLKPQLEAIVKQYSGNSKKKNTKQYVEDLERIKLETDRLYKLANIDPLSGFRPVLLTTPVWIGLYQAFSKMADGGPLSEGFFWIPSLSGPTTIAAQQNGNGISWLFPFVDGHPLLGWPDTLAYLVLPVLLVVSRYISLQIIPSSEGLPVYTKTLKKGDWPLGKSLNFVIKVNIPKVKSSQKAFDVNFQGTDPNVESSKVLDNILLSLVFGCFALLVPSGLSLYWFTDNILNTLQQIWLQKLGGAKNPLGQVLDDNVKNDPMQI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03251 427 Pfam 60Kd inner membrane protein 134 404 IPR028055 -
Trre6g03251 427 NCBIfam membrane protein insertase YidC 134 404 IPR028055 -
Trre6g03251 427 PANTHER OXA1 86 403 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03251 Trre-Chr6 30486644 30495388 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03251 62 409 Chloroplast and Mitochondria Gene Families AT2G28800 42.529 1.82e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03251 K03217 - gmx:100802546 462.611