Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03247 ATGGCGGTTCTGTTACCTTCTACACCAACTATACTCTCTACTCCGTTCGCAAACCGGATTCTTCCACTTCGACCTCACTCCCACCCCTTCTCACCCTCCACCAAACGCTTTCTTCGCGGTTCTCTTTCCATTGCCCGTTACGGATTTCAACCAGAACCGGATGAAGCCGAATTCGTTATCAGGGTATTGTTTAACCGAGCGGAGGGTTTTCTTTACACAATTGCCGATGCCGCTGTTTTTTCTTCCGATACGATGGTAACCACCGCCATCGCCACCGCCAAGCAGAACAACGATTTGCTTTCATTAATTACCAATTACGTTGAGACTCTTCTCAAGGTACTTAAGTTTGGGTTTTCTACTTTGCATGTGCCGTATGCGTATGGTTTTGCAATTATAATGCTCTCAGTTCTTGTAAACACTGTCGTATTTCCATTGAGAAGAAAACAGCTAGAATATGACATGGCAATGCGATCTTTGAAACCTCAAATAGAGGCTATTGTAAAGCAGTATGACGGGGATAAGGAGAGAATTGCACTTGAAACTGATCGGTTATATATATTAGCCAACATTGATCCTCTACCAGGATTGCTGCCCGGTCTCTTAACAATACCAGTGTGGATCGGGCTATATCGAGCCTTTTCTATGATGGCAGATGGGGGACCTCTTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACTATTGCAGCTTTGCAAAATGGAAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCGCCCCTTGGATGGCCAGATACATTGGCTTACCTTGTCTTGCCTGTTTTGCATGTTGTTTCTCAATACACTTCTCGCCAAATAATACAATCATCACAGGAACCATCAGTTTATACCAAAACCCTAGAGAAAGAAGTAGATTGGTCCGTTGGGGTATCCTTGACCTTTGAGAGAAAGGATACTGATCCGAATGTGAAGAGTTCTCAAGAAATCTTTCATGTCAATATTCAGGACACTGGTTTCGACTTGGAGAGTTCTCAATTTGAAGATGATGTCATTTCATTAGTGTTTGGTTGTTTTACTCTTTTAGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAATATGGCTTCAAAAGTTAGGTGTAAAAAATCCTTTGAGACATATTCTAGATGATATTGTGAAAAACGACCAAATGCAGATTCAAAAGTCAGTATCTAAACTAAATTCTACAAAAGTTGAAGAAACTAAAACAGTTGACAAATTTACCGCAGAGTGGCCACAACCTGGTGGCAGGTTAGTATTAACAATCACAACTACTGGATTAGACCCAGATGGCGTGACAAAGGATTGA 1371 0.4158 MAVLLPSTPTILSTPFANRILPLRPHSHPFSPSTKRFLRGSLSIARYGFQPEPDEAEFVIRVLFNRAEGFLYTIADAAVFSSDTMVTTAIATAKQNNDLLSLITNYVETLLKVLKFGFSTLHVPYAYGFAIIMLSVLVNTVVFPLRRKQLEYDMAMRSLKPQIEAIVKQYDGDKERIALETDRLYILANIDPLPGLLPGLLTIPVWIGLYRAFSMMADGGPLSEGFFWIPSLSGPTTIAALQNGSGISWLFPFVDGHPPLGWPDTLAYLVLPVLHVVSQYTSRQIIQSSQEPSVYTKTLEKEVDWSVGVSLTFERKDTDPNVKSSQEIFHVNIQDTGFDLESSQFEDDVISLVFGCFTLLVPSGLSLYWFTNNILSTLQQIWLQKLGVKNPLRHILDDIVKNDQMQIQKSVSKLNSTKVEETKTVDKFTAEWPQPGGRLVLTITTTGLDPDGVTKD 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03247 456 PANTHER OXA1 78 409 IPR001708 GO:0016020|GO:0032977
Trre6g03247 456 NCBIfam membrane protein insertase YidC 127 385 IPR028055 -
Trre6g03247 456 Pfam 60Kd inner membrane protein 127 385 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03247 Trre-Chr6 30388021 30394858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03247 60 391 Chloroplast and Mitochondria Gene Families AT2G28800 43.072 3.51e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03247 K03217 - gmx:100802546 487.648