Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03244 ATGGCGGCTCTATTACCTTGCACACCGACTATACTCTCTACTCCGTTCACAAACCGAGCCACAATCGATCTTCCACTTCGCCCTCACTCCCACGCTTTTTCACCCTCCACCAAACGCTTTCTTCGCGGTTCTCTTTCCGTTGCCCGCTTCGGATTTCAACCCGGATTTTTACCCGAACCGGAAGATGCCGAATTCGTTATCAGGGAATTGTATAATCGAGCTGAGGGTTTTCTTTACACGATTGCTGATGCTGCTGTTTCTTCTTCCGATACGGTGGTAACCACCACCACCGCCACCGCCAAACAGAACAACGATTGGCTTTCTGGAATTACCAATTATATGGAGACTGTTCTCAAGGTACTCAAGGATGGACTTTCTACTTTGCATGTGCCGTATGCTTATGGTTTTGCAATTATAATGCTTACAGTTCTTGTAAAAGCTGCCACATTTCCATTGACAAGAAAACAGGTAGAATCTGCCATGGCAATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAAAAACAGTATGCCGGGGACCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAATTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTGTTCTATTAACAACACCAGTGTGGATTGGGCTATATCGAGCCTTTTCTAATGTGGCAGATGAGGGACTCCTTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCTCGGCAAAATGGAAGTGGTATCTCATGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGCCAGATACGTTGGCTTACCTTGTCTTGCCTGTTTTGCTGGTTGTCTCTCAATACATTTCTCTCCAAATAATACAATCATCACAGGCTACTGATCCCAACGTGAAGAGTTCCCAAATCTTAAACAAGGTCCTTCCATTAGTGATTGGTTATTTTGCTCTTTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAGTATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTTTGAGACAAGTTCTAGATGATAATGTGAAAAATGACCCAATGCCGATTCAGAAGTCAGTATCTAAACTAAATTCCACAAAAGTTGAAGAACCTAGAAAAGGTGAAAAATTGACATCAGAGGGGCCACGACCTGGTGACAGATTTAAGCAATTAATGGAACTAGAAGCAAGGAAGAAACAGCAGCGAGAAGAAGAAAAAAGGAAGGCTGAAGAAGCAGCAGCTAAAGCTAATCACGAGCAAACAATTGAAGGGAGAAATCAATCTGCAGGCGACTTCGTTGAAAATTCCCAATCTGTTGGTGCTGATACTGATCCGTCCATATCTGGAGTAGTAAATGGGAATCCGCTAAGTAAGGACTTGGAGGGAAATCAGAATTCTACATCTAAATCTGGCTCTGAAAATGAGGAAGGTTCTGATCATTTCAATGCAGTAAACAAGAAAAGTCTAGAAAAGGGACCAAAAGAAGTATTAACAACCTCAACTACAAACAAGCAACCTCATGGAGAAGACCCAGATCACGTGACAAAGGATTGA 1599 0.429 MAALLPCTPTILSTPFTNRATIDLPLRPHSHAFSPSTKRFLRGSLSVARFGFQPGFLPEPEDAEFVIRELYNRAEGFLYTIADAAVSSSDTVVTTTTATAKQNNDWLSGITNYMETVLKVLKDGLSTLHVPYAYGFAIIMLTVLVKAATFPLTRKQVESAMAMRSLQPQVKAIQKQYAGDQERIQLETARLYKLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLSEGFFWIPSLSGPTTIAARQNGSGISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIIQSSQATDPNVKSSQILNKVLPLVIGYFALSVPSGLSLYWFTNNILSTLQQVWLQKLGGAKNPLRQVLDDNVKNDPMPIQKSVSKLNSTKVEEPRKGEKLTSEGPRPGDRFKQLMELEARKKQQREEEKRKAEEAAAKANHEQTIEGRNQSAGDFVENSQSVGADTDPSISGVVNGNPLSKDLEGNQNSTSKSGSENEEGSDHFNAVNKKSLEKGPKEVLTTSTTNKQPHGEDPDHVTKD 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03244 532 CDD 5TM_YidC_Alb3 135 348 IPR047196 -
Trre6g03244 532 PANTHER OXA1 82 420 IPR001708 GO:0016020|GO:0032977
Trre6g03244 532 MobiDBLite consensus disorder prediction 488 508 - -
Trre6g03244 532 NCBIfam membrane protein insertase YidC 134 348 IPR028055 -
Trre6g03244 532 MobiDBLite consensus disorder prediction 435 487 - -
Trre6g03244 532 Pfam 60Kd inner membrane protein 134 348 IPR028055 -
Trre6g03244 532 Coils Coil 403 434 - -
Trre6g03244 532 MobiDBLite consensus disorder prediction 361 532 - -
Trre6g03244 532 MobiDBLite consensus disorder prediction 380 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03244 Trre-Chr6 30373059 30379258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03244 62 421 Chloroplast and Mitochondria Gene Families AT2G28800 52.222 1.68e-127 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03244 K03217 - gmx:100802546 731.095