Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03228 ATGGCTTTATTTTCTCTCTTTCTCCTCACATTTCTTGTGTTAATATCATCTTCATCTTCTCAACTTCAAGAGTTTATAAGCATTGATTGTGGAGGAACAAGAAGTAACTACACTGACACAACCACAGGGATAACATGGATTTCAGATTCTGAGATAATGAAACATGGAGAAAAAGTGGAAGTAAGAAACCCTAATGGAAACCAAGTTCAGTATCAGAAAAGAAGAGATTTTCCAACAGATAGCAGAAAATATTGTTATACACTTGAAACTGAAGAGAGAAGAAGGTATTTGGTAAGAACAACTTTTCAGTATGGAAAATTGGAATATGGAGATACATATCCTCAGTTTCAACTTTATTTAGATGCAACAAAATGGGCTACTGTGTCAATTTATGATGATGAAAGAGTATATGTTAAGGAAATTATCTTTAGGGCGCCTTCGAATTCTGTTGATGTTTGTGTTTGTTGTGCTACAACTGGTTCTCCTTTTATATCTACTCTTGAGCTTAGGCCTTTGAATCTTTCTATGTATGCTACTGATTTTGAGGATGATTTCTTCTTGAAAGTAGCTGCAAGGATTAACTTTGGTGCTCCAACTGAGGATGCTGTCAGGTATCCGGAGGATCCATATGATAGAATATGGGAGTCTGATCTTGTTAAAAGACAAAATTTTCTTGTCGGGGTGGCAACAGGAACAGAAAGAATTAGCACAACAAGAAACATAGATATAGAGACGAGAGAATATCCACCGGTTAAGGTGATGCAAACTGCAGTTGTTGGCACAAAAGGGTTACTTACCTACAGACTTAACCTTGAAGACTTTCCTGGTAATGCTAGAGCTTATGCTTATTTAGCAGAGATTGAAGATTTGGGTCAGAATGAGACTAGGAAATTCAAATTGGAACAGCCTTATTTTGCTGACTATAGCAATGCAGTGGTGAACATAGCCGAGAATGCTAATAGAAGCTACACTCTTTATGAACCAAGTTATATGAATGTGAGTTTGGAATTTGTTCTTTCCTTTTCCTTTAAGAGGACGCCGGATTCGACTAGAGGACCTCTATTAAATGCAATGGAAATAAGCAAATATCAAGAAATTGCTTCGAAGACCTTAAAGCAAGATTCAAATTCTGTAAATGCATTTGCCAACTTGTCTGATGAAATTATCCCGAAGAATGAAGGCGATCCTTGCGTTCCAACTTCCTGGGAATGGGTGAATTGTAGTACTATTACACCTCCAAGAATTACAAAGATAAACTTGACAAGAAGGAATTTGACCGGTGAAATCCCGCAAGAGCTCAACAACATGGATGCATTGGAAGAACTGTGGTTAGATGGAAACTCGCTTACAGGACAACTACCAGACTTGAGCAATCTTATCAGTCTAAAGATTGTGCATCTAGAGAACAACAAATTGACCGGTTCACTACCGTCTTACCTCGGTAGCTTGCCAAGTTTACAAGCATTGTACATACAGAATAACTCATTTACCGGGGATATACCAGCAGGATTATTATCTTCAAAAATCACTTTCAAATATGATGATAATCCTAGACTACATAAAAAGAACAAAAAGCATTTTCAGTTGATAATAGGAACTGCTATCGGAGTACTTGTGATTCTATTAGTCTTGTTCTTAGCAAGTTTGGTGTTATTGCATTACCTAAGGAAAAAGGCTCTTCAAAAGAGAAGTGATGAAAAAGGTATTTCAGGACGCAGTAAACACATAAACGGATACTCTTTTGGTGTGGATGGAAATTTAATGGATGAAGATGGTAAAGAGATCGCAGTTAAGACTATGACCGATCCATCCAGCCATGGGAACCATCAATTTGCAACCGAGGTAGCTCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGCGAAGAAGAATATCAGCATATTCTGGTTTATGAGTATATGCATAATGGAACTCTAAGGGATCACATTCATGAATGTTCGAGTCAGAAACGATTCGACTGGTTAACTCGTCTTCGAATTGCAGAAGATTCAGCCAAAGGTCTCGAGTATTTACACACCGGATGCAATCCTAGTATCATTCACCGAGACGTAAAGACAAGCAACATTCTCCTAGACATCAATATGAGAGCAAAGGTGTCAGATTTTGGACTGTCAAGACTCGCCGAAGAAGATTTAACTCATATATCAAGTGTTGCAAGGGGAACCGTGGGATACTTGGATCCTGAGTACTATGCAAATCAACAATTGACTGAAAAGAGCGATGTATACAGTTTTGGAGTTGTTTTATTGGAACTGATATCTGGAAAGAAGCCTGTATCACCAGAAGATTATGGTCCAGAAATGAATATAGTTCATTGGGCAAGATCTTTAATTCGTAAAGGCGATATAATTAGCATTATGGATCCTTTGCTAATTGGAAATGTGAAAACTGAATCAATATGGAGAGTTGCTGAAATTGCCATGCAATGTGTAGAACCACATGGTGCATCAAGGCCAAGGATGCAAGAAGTGATTTTGGCTATACAAGATGCTTCTAAGATAGAAAAAGGAACAGAAAGTCAACTAAAGATATCATCTTCAGGTGATTCAAAACCACAATCTTCAAGGAAAACTTTGCTTACAAGTTTTCTTGAAATTGAAAGCCCTGATTTATCAAATGGTTGTCTTCCATCAGCAAGATAA 2679 0.3751 MALFSLFLLTFLVLISSSSSQLQEFISIDCGGTRSNYTDTTTGITWISDSEIMKHGEKVEVRNPNGNQVQYQKRRDFPTDSRKYCYTLETEERRRYLVRTTFQYGKLEYGDTYPQFQLYLDATKWATVSIYDDERVYVKEIIFRAPSNSVDVCVCCATTGSPFISTLELRPLNLSMYATDFEDDFFLKVAARINFGAPTEDAVRYPEDPYDRIWESDLVKRQNFLVGVATGTERISTTRNIDIETREYPPVKVMQTAVVGTKGLLTYRLNLEDFPGNARAYAYLAEIEDLGQNETRKFKLEQPYFADYSNAVVNIAENANRSYTLYEPSYMNVSLEFVLSFSFKRTPDSTRGPLLNAMEISKYQEIASKTLKQDSNSVNAFANLSDEIIPKNEGDPCVPTSWEWVNCSTITPPRITKINLTRRNLTGEIPQELNNMDALEELWLDGNSLTGQLPDLSNLISLKIVHLENNKLTGSLPSYLGSLPSLQALYIQNNSFTGDIPAGLLSSKITFKYDDNPRLHKKNKKHFQLIIGTAIGVLVILLVLFLASLVLLHYLRKKALQKRSDEKGISGRSKHINGYSFGVDGNLMDEDGKEIAVKTMTDPSSHGNHQFATEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHECSSQKRFDWLTRLRIAEDSAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGPEMNIVHWARSLIRKGDIISIMDPLLIGNVKTESIWRVAEIAMQCVEPHGASRPRMQEVILAIQDASKIEKGTESQLKISSSGDSKPQSSRKTLLTSFLEIESPDLSNGCLPSAR 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03228 892 ProSiteProfiles Protein kinase domain profile. 570 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g03228 892 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 409 505 - -
Trre6g03228 892 Gene3D Phosphorylase Kinase; domain 1 580 646 - -
Trre6g03228 892 SUPERFAMILY Protein kinase-like (PK-like) 589 837 IPR011009 -
Trre6g03228 892 Pfam Malectin-like domain 28 362 IPR024788 -
Trre6g03228 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Trre6g03228 892 Gene3D Ribonuclease Inhibitor 368 524 IPR032675 -
Trre6g03228 892 Pfam Protein tyrosine and serine/threonine kinase 589 837 IPR001245 GO:0004672|GO:0006468
Trre6g03228 892 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 646 853 - -
Trre6g03228 892 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Trre6g03228 892 SMART serkin_6 549 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g03228 892 SUPERFAMILY L domain-like 396 506 - -
Trre6g03228 892 PANTHER OS07G0107800 PROTEIN-RELATED 456 843 - -
Trre6g03228 892 Gene3D Transferase(Phosphotransferase) domain 1 647 862 - -
Trre6g03228 892 MobiDBLite consensus disorder prediction 850 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03228 Trre-Chr6 30163513 30169272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03228 1 892 Receptor kinase-like Gene Family AT1G67720 65.595 0.0 1192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre6g03228 Malectin_like 3e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03228 - - gmx:100807148 1441.79