Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03214 ATGGAGATTGACAGTGTTGAGGTAATGAGTTTGGAAGATGGTTTTCTGGGATCATGGCATCCGGGAAAAATTGTTCTATATGTGAGGAAGAAGTCATATGTCAAATATGACAATATTCTCAATGATGAATCAAATTACCTTGTTGAAGTGGTGAATGTTTCTAGTGTTTTGATGATGTGTATCCTCCATCTGGTTCAGAATGTGGCTATCAATGTGTTCTAA 222 0.3649 MEIDSVEVMSLEDGFLGSWHPGKIVLYVRKKSYVKYDNILNDESNYLVEVVNVSSVLMMCILHLVQNVAINVF 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03214 73 Pfam Agenet domain 4 56 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03214 Trre-Chr6 29995424 29996239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03214 10 57 PHD Transcription Factor Family AT5G58610 46.000 2.13e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03214 - - vra:106763506 72.0182