Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03201 ATGAACCGAGATTCGGATGCTTGTCCTCAAACTAAGGATCCTTTTACAGTTAATATTCAAGTTGAGCCAGAATTGTGTCCTCTAGCCATCGTGAAATGCTACTTTCACTCATTAGAGAGAAACTCAGATGATAAGAGAAAGTGGAAGTTGAAGGCAAAAAAACATTTGTTAGTAGAAAGATGGATGTTTGACTATCCAACTGAAAGAAGGAAGACAACTTTGTACAAGTCTCCACAGAATTGGTGTTTAGGTACACTTCAAGCATTTCATAAGAATTTTCTTAATATGGAGGACATCCTTGATGGTGATTGGTTTTTTCCATCATGTCGTTGCGGGATTTGCGGCCAAAACAAAATTGAAAAGACCGAGGATGAACATTGTCTTGCTTGTATTCAGTGTGAACATACATATCATGTTGAGTGCCTCAGAAATAAAGAAAATGATAATTCAAGACTATATCAGGAAAATTGGTTTTGTGGAGAAGAGTGTGTAAGGGTATTCTATACAGGGCTCCAAAATCTATTGGGAAAACCGGTTTTACTAGGTGAGAACAATCTAACTTGGACATTGTTGAAGTATGTCAACTCTGAAAATAGTGGTGTTGGCAATGCTGAATATGACTTAGTAGCAGAGAGTTACACTATACTCCGTGTTGCACTTTCGGTGATGCATGAATGTTTTGAGCCCTTACATAAATCATTTGCACGATTGCCTGTTATGAGTTAG 726 0.376 MNRDSDACPQTKDPFTVNIQVEPELCPLAIVKCYFHSLERNSDDKRKWKLKAKKHLLVERWMFDYPTERRKTTLYKSPQNWCLGTLQAFHKNFLNMEDILDGDWFFPSCRCGICGQNKIEKTEDEHCLACIQCEHTYHVECLRNKENDNSRLYQENWFCGEECVRVFYTGLQNLLGKPVLLGENNLTWTLLKYVNSENSGVGNAEYDLVAESYTILRVALSVMHECFEPLHKSFARLPVMS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03201 241 PANTHER PHD FINGER PROTEIN 12 88 231 IPR042163 GO:0003714|GO:0045892
Trre6g03201 241 SMART PHD_3 110 163 IPR001965 -
Trre6g03201 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 166 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03201 Trre-Chr6 29853874 29855866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03201 82 232 PHD Transcription Factor Family AT5G58610 40.127 1.67e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03201 - - gmx:102661511 207.223