Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre6g03175 | ATGATGGTGTTGGTGAATTCTAGTAATAATACAGGTTTAAGAAAACAAGTATTTCCAATTGATTACGAAACAGAAATGTCACAGCGTCTCGTAGATGCTGTTCATCACGGTGAAACTGATATTGCCATTCAATATCTATCCAATACTTCGGTTGATGTTAACTTCATTGGAACAGTTTTGTTGAAATCCAAAACCACTGAGATTGTTCTTCAAGATGAGTTACCTCACCGAGTTCACTCGGTTTATCAAGAGTTTAAAACTGAGGTTACTGCTCTTTTTTTGGCTGCACATTCTGGAAATTTCATACTCCTTCGTAAACTACTGAATGTGGGAGCTAATGTAAATGTGAGATTGTTCCGAGGCTATGCTACAACAGCAGCAGTGAGGGAAGGACATTTGAAAATATTGGAGGTTCTTATCAACGGTGGAGCGTCACAACTTGCATGTGAAGAAGCTTTACTTGAAGCATGCTACGTAGGACGGGCCACATTTGCTGAACTGTTGATGCAGTCCAACATGGTCCGTCCTCATGTTGCAATTCATGCCCTTGTTTCTGCTTGTTGCAGAGGCTTCATTGAGGTTGTCGATGTACTCATCAAGCATGGAGTGGATGTGAATGCAATGGATAGGACTCTACTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTGATTGCAATGCATTATTTGCTGCTGTGGTCAGCAGGCAGATTAATGTTGTTAGACTATTGTTGCAGGTTGGTGTAAGACTTGATATCAAGGTGAAATTGGGAGCTTGGTCTTGGGAAACAGATACAGGAGAAGAATTTCGAGTCGGTGTTGGACTAGCCGAGCCTTATCCAATCACATGGTGTGCTGTAGAATATTTTGAATCCACCGGAACTATACTCCATATGCTTCTCCAACACCTCTCACCTAATAGTTTCCACATCGGAAGAACTCTCTTGCACCACACCGTTGTTTGTAACAACGAAAGAGCATTGAATATACTTCTCAATAATGGTGTGGATACAGAATTAGTACTTCAAACTACTGAAGAAACAAATGTACACCCTATTCACATGGCTGCGCGACTTGGATCATGCAGCATTCTTCAGTCTTTGATTGATGGTAAGTGTAACTTGGACTCACAAACAAAATTTGGTGACACAGCATTGATGATTTGTACAAGGTATAAAAATGAGAAGTGTCTTAGAGTTTTAGTATCTTCGGGAGCCGATTTGGGGATTGTAAATTCGTCCGGTCATTGTGCAACTTCATTAGCAAATTTTGTTCAGTGGAGTAAAGAATATCAGAAAGCAATTTTGGATATCATTAGAGGCGGAAAAGTTCTTAAATCAAGCAATGCGTGTGGATTTTCAACTTTGTTATTCGTCACTGGCGCGAATGACATAGAGGCTTTGAAAAAACTCATCGAAAATAAAAACATAAATCTAGATGAACAAAATGGGAATGGATTTTCAGCTGCAATGATAGCTTGTGCAGGGGGTAATGTGGAAGTTTTCAAGTTGCTTCTTTATGCTGGAGCTGATGTAATTAATCTGAAAAACAAATATGGTTTAACAGCTCTTAATCTAATAGACTTAAACCAAAAAGGTGAAAATGGCGAAAAATTCCATAAGGTGATGTTTGACTATGCACTTCAAAAAGGATGCAATGTTGTTACTTTAGCCGTGGCGAATCCTCTTCACCGTGCAGCTTGTTATGGAGACATAAACATTGTTGAAAAATTATTAAAACAAGGGTATTATGATGTGAATGGTTTTGATGGAAATGGATATACACCATTGATGTTAGCAGCAAGAGAAAATAAAGGTGAAATGTGTGAGATTTTGATATCTTACGGAGCGAAATTCGATATTGAGAATGAAAAACAAGAAACAGCACTTTTACTTGCAAGAAAAAATGGGAAAGGAAATGATGCAGAGAGTGTGATAATAGATGAGTTAGCTAGAAGAGTAGTGTTGTGTGGTGCACGTGTGAAGAAACATACAAAATGTGGTAAAGGATTACCACATAGGAAACAATTGGTAATGGTTGGTGCTGCTGGAATCTTACGTTGGGGGAAATCAAATAAGAGAAATGTTGTTTGTAAAGTGGCTGAGGTTGGACCAAGTGAAAGATTTCGATGGAACCGAAGGAAGAAGTTTGATGTTGATGAACAAGGAATGTTTTATGTTGTTACTGCTAAAAATAAAGAGGTGCATTTTGTTTGTGAAGGTGGGGTTGAAATGGCTGAGTTATGGGTTAGGGGGATTAGATTAGTAACAAGAGAAGCTATTTTTGGTTCTAGAGCTAATACTGATTAA | 2310 | 0.3848 | MMVLVNSSNNTGLRKQVFPIDYETEMSQRLVDAVHHGETDIAIQYLSNTSVDVNFIGTVLLKSKTTEIVLQDELPHRVHSVYQEFKTEVTALFLAAHSGNFILLRKLLNVGANVNVRLFRGYATTAAVREGHLKILEVLINGGASQLACEEALLEACYVGRATFAELLMQSNMVRPHVAIHALVSACCRGFIEVVDVLIKHGVDVNAMDRTLLQSSKPFLHANVDCNALFAAVVSRQINVVRLLLQVGVRLDIKVKLGAWSWETDTGEEFRVGVGLAEPYPITWCAVEYFESTGTILHMLLQHLSPNSFHIGRTLLHHTVVCNNERALNILLNNGVDTELVLQTTEETNVHPIHMAARLGSCSILQSLIDGKCNLDSQTKFGDTALMICTRYKNEKCLRVLVSSGADLGIVNSSGHCATSLANFVQWSKEYQKAILDIIRGGKVLKSSNACGFSTLLFVTGANDIEALKKLIENKNINLDEQNGNGFSAAMIACAGGNVEVFKLLLYAGADVINLKNKYGLTALNLIDLNQKGENGEKFHKVMFDYALQKGCNVVTLAVANPLHRAACYGDINIVEKLLKQGYYDVNGFDGNGYTPLMLAARENKGEMCEILISYGAKFDIENEKQETALLLARKNGKGNDAESVIIDELARRVVLCGARVKKHTKCGKGLPHRKQLVMVGAAGILRWGKSNKRNVVCKVAEVGPSERFRWNRRKKFDVDEQGMFYVVTAKNKEVHFVCEGGVEMAELWVRGIRLVTREAIFGSRANTD | 769 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre6g03175 | 769 | PANTHER | ANKYRIN REPEAT-CONTAINING | 18 | 750 | - | - | |
| Trre6g03175 | 769 | ProSiteProfiles | Ankyrin repeat profile. | 87 | 119 | IPR002110 | GO:0005515 | |
| Trre6g03175 | 769 | ProSiteProfiles | Ankyrin repeat region circular profile. | 87 | 117 | - | - | |
| Trre6g03175 | 769 | Gene3D | - | 532 | 668 | IPR036770 | - | |
| Trre6g03175 | 769 | ProSiteProfiles | Ankyrin repeat region circular profile. | 592 | 624 | - | - | |
| Trre6g03175 | 769 | Gene3D | - | 19 | 150 | IPR036770 | - | |
| Trre6g03175 | 769 | ProSiteProfiles | Ankyrin repeat profile. | 381 | 413 | IPR002110 | GO:0005515 | |
| Trre6g03175 | 769 | Pfam | Ankyrin repeats (3 copies) | 320 | 410 | IPR002110 | GO:0005515 | |
| Trre6g03175 | 769 | Pfam | Ankyrin repeats (3 copies) | 545 | 622 | IPR002110 | GO:0005515 | |
| Trre6g03175 | 769 | Coils | Coil | 462 | 485 | - | - |
Showing 1 to 10 of 32 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre6g03175 | - | - | mtr:11444172 | 1319.68 |
Showing 1 to 1 of 1 entries