Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03115 ATGGCTATCTTATATGTGTTGAAGAAAATCAGGCTTGCTAGGCAGACTGAGAGATATAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCAAGAATCAAGCACCCTTACATTGTGGAATTTAAGGAAGCATGGGTGGAGAAGGGTTGCTATGTCTGCATTGTCACCAGATATTCTAAGACTGCACTAAGCCAATGGGAAATGCAGCTAGTGTCTTTGAAACTTGATTGA 231 0.4113 MAILYVLKKIRLARQTERYRRSAHQEMALIARIKHPYIVEFKEAWVEKGCYVCIVTRYSKTALSQWEMQLVSLKLD 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03115 76 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 4 59 - -
Trre6g03115 76 Gene3D Phosphorylase Kinase; domain 1 2 58 - -
Trre6g03115 76 SUPERFAMILY Protein kinase-like (PK-like) 4 65 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03115 Trre-Chr6 28714998 28716014 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Trre6g03115 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03115 K08857 - psat:127119140 108.227