Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03097 ATGAAGGGGAAGCAGTTGAAGAGAGTGCAAAATAGGCAAAGTCGTTCTTCATTTATGTGGTGGACAACTAGGATGCTGAATTTTATGCCAAGTATTATTGTACAGTACACAACAGCAATTGATATATGGAGCATTGAATGCATTTTTGCAGAAGTGCTGACAGGAAAGCCATTGTTTCCTGGTGAAAGCATTGTGCATCAATTAGATTTGATTACCGATTTTCTTGGAACACCACCACCCGAAATTATCTCAGGAGTTCCAAAGGAGAAGGCAAGGAAGCACCTGATGGAGATGCAGAAGAAACTTCCTCTGCCATTTGAACGGAAATTTTCGCACAACTTCCTGTATCCTAGTGCAATAGACCAATTCAGAAAGCACTTTGCATATCTTGGCTATTGA 399 0.406 MKGKQLKRVQNRQSRSSFMWWTTRMLNFMPSIIVQYTTAIDIWSIECIFAEVLTGKPLFPGESIVHQLDLITDFLGTPPPEIISGVPKEKARKHLMEMQKKLPLPFERKFSHNFLYPSAIDQFRKHFAYLGY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03097 132 SUPERFAMILY Protein kinase-like (PK-like) 35 111 IPR011009 -
Trre6g03097 132 Gene3D Transferase(Phosphotransferase) domain 1 33 120 - -
Trre6g03097 132 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 30 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03097 Trre-Chr6 28377559 28379872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03097 20 110 MAP Kinase Gene Family AT3G14720 64.835 2.53e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trre6g03097 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03097 - - gmx:100800878 130.568