Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03034 ATGATAATGTTACCGTTTTGCTCAGCCACACCGTGTTATTCCCCTTCTTCTCAGATTCCTTTATTTGGAGGATTTCAATCTCTGTATCCAATTCGAAAGGATTTTGAGAGTAAATGTGTTGCAGAAGAAAGTTTACATTTAGGTTTGCATTATAGAACATCTTCACTTAGAAATTCATTTGCAACACAAGCTATAAAGAATGGTGAATTTAGATATAGTTTATCGACCGTGCCGGAGGAATCAGTAGACTTTGCAGGACAGTCAACTGAAGGATCTGATGCATTAGTAGTACCTGCACAACCAGAAGCGATATTGAGTACTGATATATCGTCCGGGAAGTTTGAATCTGTGTCTAGTTTGATTCAAGGGGGTAATGAATCGTTAGATGCTACAAAAGCAAGTGTCGGTGACCTTGTTTCTGGAGTAAACGAGTCGTTCAATGCCGCAGTTAATAAGGGAGAAGATGTTTTACGAAGCTCGCTGGATACGGCTACTTCTTTTGTTGATTCTATTGTTAAAAATGCTACTACATCTGCAGATAATGCTTTTAGTAAGGTGTTTTCTTCTGTTGATCAAACGGGAGATTTGGCGAGTAAGAAAATTACTAGTGTTTCGAGTGGGATAAATGGAGTCACGAGTAAGGCACCTGCTTTGGTTATTGATGTATTGCGCCGCACAGTCGTTGTGGTAGAGAGTTCTTTATCTAAGGGGGCTTCCTATGTTGTTTACTTGTATGGATCAGCCAAGGAGGTTCTTCCTGCAGAGATTAGGGATTCAGTCAATGTATATGAAGGAAAAGCAACACAAATCTTAAGGCCTGTTGGGTCTGCAACTCAACAGATATACACGGCTTTCTATTCATTGGAGAAGAGTCTTGGTTTGGATCCAAACGACCCAATTATTCCATTTGTTGTTTTTGTCGGCTCTTCAGCAACATTATGGGCTATTTATTGGTTGTGGAAATATGGAGGTTACTCAGGAGATTTATCCCCTAAATCAGCTTTTGAGCTCCTGTCTGGAGACTCAAATGCTGTACTTATAGATGTCCGCTCTGAGGATTTGCGAGAAAAAGATGGTATTCCTGATATTCGACGGGCTGCTCGGTTTCGCTATGCAAGTGTATCTCCAATCGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGGGTGGTAGAGACCTGGATGATTTCTTGGTTGCTGTTGTGATTCACAATTTGAAAATTGTTAAGGACAGTTCCAAGGTTATTGTGTTGGATGCTGATGGCACTCGTTCTAAAGGCATTGCAAGGTCCTTGAAGAAAATTGGGATCAAGAATCCATACTTGGTCCAAGGTGGCTTTCAGTCTTGGACTAAACAAAGTCTCCGCATCAAGGAACTCAAACCTGAAACAGCATTTACCATATTTAACGAGGAAGCTGAAGCAATTCTAGAGGATATTAGACCTTCTCCTTGGCAACTTTTAGGTTATGGTACGGCACTACTTGCAGGGTCATATGGATTAGTAGAGTGGGAGAAAACATTGCAGTTTATTGGTGTCTTTGGCCTCGGTTTGACCTTATATCTGCGGGTTTCTTCATATGAAAGGTCAGAAGATTTGACGCAAGATGCGAGGCTATTGCTTGCTCCTGTTAAACTTGGAGGTCAGGCGTTTTCATGGGCTGCCGGAAAATTGGAATCAAATGGCATAGGGTTACCTACATCACCTTCATCTTTAGATGTTCAGAACCGGGTGTTACAGGCAGCTGCCAAACATGAATCCCAACCATCTGACAGTGAAGGTAACCAAGACCCGAATCCTGAATCCACAGTTACTCTCAATCAAAATGCATGA 1830 0.4169 MIMLPFCSATPCYSPSSQIPLFGGFQSLYPIRKDFESKCVAEESLHLGLHYRTSSLRNSFATQAIKNGEFRYSLSTVPEESVDFAGQSTEGSDALVVPAQPEAILSTDISSGKFESVSSLIQGGNESLDATKASVGDLVSGVNESFNAAVNKGEDVLRSSLDTATSFVDSIVKNATTSADNAFSKVFSSVDQTGDLASKKITSVSSGINGVTSKAPALVIDVLRRTVVVVESSLSKGASYVVYLYGSAKEVLPAEIRDSVNVYEGKATQILRPVGSATQQIYTAFYSLEKSLGLDPNDPIIPFVVFVGSSATLWAIYWLWKYGGYSGDLSPKSAFELLSGDSNAVLIDVRSEDLREKDGIPDIRRAARFRYASVSPIEVDGSIRKLLKGGRDLDDFLVAVVIHNLKIVKDSSKVIVLDADGTRSKGIARSLKKIGIKNPYLVQGGFQSWTKQSLRIKELKPETAFTIFNEEAEAILEDIRPSPWQLLGYGTALLAGSYGLVEWEKTLQFIGVFGLGLTLYLRVSSYERSEDLTQDARLLLAPVKLGGQAFSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPNPESTVTLNQNA 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03034 609 SMART rhod_4 330 455 IPR001763 -
Trre6g03034 609 ProSiteProfiles Rhodanese domain profile. 340 458 IPR001763 -
Trre6g03034 609 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 606 IPR044690 GO:0009704|GO:0071277|GO:0090333
Trre6g03034 609 Gene3D - 325 467 IPR036873 -
Trre6g03034 609 MobiDBLite consensus disorder prediction 579 609 - -
Trre6g03034 609 Pfam Rhodanese-like domain 337 451 IPR001763 -
Trre6g03034 609 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 313 456 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03034 Trre-Chr6 27490528 27496218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03034 302 419 Sulfurtransferasese or Rhodanese AT5G23060 28.571 1.89e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03034 - - gmx:100786142 892.878