Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03025 ATGAGCATAAATGCAAATGAAACTTTGTTTAATTCAATTACAAGATTGAATGAAACCGGCTACAAAGTTTGTTATGATGCTCCACCCCATATTGTTTCAGATGGTTTATGGGGTGGTCAAGAAAATGGAAGGACGCCGATGAAATCTTTTTTGCCCGTTATTGAGTTACAGTTGCTTATCATTTTTATCATCACCCAAATATGCAGTTTTCTTCTCAAACCCTTGAGACTTCCTCTATTCATTCCACAAATGATGGCTGGGTTAATTATAGGTTTTTCATTTGAGATAAAGTCATTGGAGGCATACATGACCATGTTGTTTCCATATGGAACACATGATATAATTTCAGCAATTTCATCAATTGGTTTTGTACTTTTTATATTCATAAACGGAGTACAAATGGATTTCAGCATGATAACAAGAACAGGAAACAAAGCATGGACGATTTCAGTAATGGGATTAGTTATACCATTAGCCATTGGATTTGCGCCACTCGTATTATTTCCTGAAAAGGTACAAGCCATCGAAAAAGCACGTGGGCGTGGAATATATGTGGCATTGATATCTCACAGCATAAGTTCATTTGCAGTAATTGCTTCATTCTTAAGTGAACTTCAAATCCAAAACTCCGAACTCGGTAGATTGGCTTTGTCCTCGGCTTTGGTTATCGACATATTGAGAACAATCATTACAACTAATATTGTTGCTATTATGAGTCATCCTAATATGGAAGTGGTTTTAAGAAACTTGTTCTCACTTTTTGCACTTGCTATACTCATTCCATTAATATGTAGGCCAATAATGTTTTGGATAATTAAACATACACCAGAAGGAAGACCTGTGAAAGATGGTTATATTTATATCATCATTACAATGGTTTTTGGTTTAGGTGTTTTATCAGTTAAAATAGATCAAGAATTTATTTTAGGACCTTTCATTTTGGGACTATCTGTTCCTGAAGGACCTCCTTTAGGATCTGCATTAGTTAAGAAGCTACAATTCTTTGGTCCAACATTCTTTTTACCTATCTTTGTGACTACCTCTGTGTTGAAATCCGATTTTTCAATGGATATTTCATCATTTGTTATGGTGTCTATTGGTTCCGTCATCCTTGTTACTCATTTGGTCAAAATAACAGTCTGTTTTGTAACTGCCTTGTTCTGCAAGATGCCCATCACTGATGCTTTGTGTCTTGCCCTCATTTTGAACACCAAAGGCGTAGTCGAAGTCGGCATCTACAATTGCTTATTCGACAATAATATTCTTGACGGGCAATCATATGGAGTGTTGATGATTAGTGTAATGATGACAGCAAGCATTATGCAATGGTCAGTGAAATTACTATACGATCCTTCAAGGAAATATGGTGGATACCAGAAAAGGAGCATAAGGAGCTTAAAAAGTAATTCAGAAGTGAGAATACTAATAACACTACAAAAACAGAACCATATTTCAGCAGCAATAGATTTCCTTGACCTAAGTTGTCCAACACATGAAAATCAAATCACTGTTGATGTACTTCATGTAATTGAGCTAGTTGGAAGAGCTTTACCTCTTTTCATTCCTCATAGTCATAGCCTTCAACAACAAGAATCAAGATCATCGGCTTCACACAGATCATACTCTGACGATATCATCCTTGCTTTCGATATGTACCAACACCATAATGCAGATGCAGTGACAATAAACACTTACACGGCAATATCCCCAGCAAATCTCATTTTTGAAGATGTTTGTAACCTTGCATTGGACAAAGTTGCATCCATCATCATTCTTCCATTTCATATAAGGTGGTCTAGTGACGGCGTAGTTGAATCTAATGACAAAAAGATTTTAAGACCATTGAACCAAAGAGTCCTTGAAATAGCTCCATGTTCCGTTGGAATCCTAGTAACTCGCGCTAATTCAATACCAAAAGCAACAACAACAACAACTGCTGCACGATTGGCAGTCATTTATTTAGGTGGAAACAACGACGATGATGAAGAGGTTTTATGCTTAGCAAAACGATGTATGAATAATCCTAGGATCAACCTTGTTGTTTACCACCTTGTTGGTAAAGATTGCAAAGGAGACTTGGAGCAATTAATGGTAAATGATGATGATCAAGTGTTGCAAGAAATGATACATGCTACAAATGTGAGGTATCAAAAGATATTTACAAAAAATGGATCACAAACAGCTTCTTTTCTACGTCAAGTTGTGAATCAACATGATTATTTTTTAGTTGGAAGAAGACATGAAACTCATTCTCCTCAAACCGTTGGATTAACAGATTGGATTGAATTTCCAGAACTTGGTGCTATTGGTGATTTTCTTGCTTCACCTGATCTTAATAGTCGTGCATCTATTTTGGTTGTGCAACAACAACTCTCACACAAGAACCAACACAAAGGTTGGTTTTTGTAG 2409 0.3624 MSINANETLFNSITRLNETGYKVCYDAPPHIVSDGLWGGQENGRTPMKSFLPVIELQLLIIFIITQICSFLLKPLRLPLFIPQMMAGLIIGFSFEIKSLEAYMTMLFPYGTHDIISAISSIGFVLFIFINGVQMDFSMITRTGNKAWTISVMGLVIPLAIGFAPLVLFPEKVQAIEKARGRGIYVALISHSISSFAVIASFLSELQIQNSELGRLALSSALVIDILRTIITTNIVAIMSHPNMEVVLRNLFSLFALAILIPLICRPIMFWIIKHTPEGRPVKDGYIYIIITMVFGLGVLSVKIDQEFILGPFILGLSVPEGPPLGSALVKKLQFFGPTFFLPIFVTTSVLKSDFSMDISSFVMVSIGSVILVTHLVKITVCFVTALFCKMPITDALCLALILNTKGVVEVGIYNCLFDNNILDGQSYGVLMISVMMTASIMQWSVKLLYDPSRKYGGYQKRSIRSLKSNSEVRILITLQKQNHISAAIDFLDLSCPTHENQITVDVLHVIELVGRALPLFIPHSHSLQQQESRSSASHRSYSDDIILAFDMYQHHNADAVTINTYTAISPANLIFEDVCNLALDKVASIIILPFHIRWSSDGVVESNDKKILRPLNQRVLEIAPCSVGILVTRANSIPKATTTTTAARLAVIYLGGNNDDDEEVLCLAKRCMNNPRINLVVYHLVGKDCKGDLEQLMVNDDDQVLQEMIHATNVRYQKIFTKNGSQTASFLRQVVNQHDYFLVGRRHETHSPQTVGLTDWIEFPELGAIGDFLASPDLNSRASILVVQQQLSHKNQHKGWFL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03025 802 Gene3D - 54 455 IPR038770 -
Trre6g03025 802 Pfam Sodium/hydrogen exchanger family 60 440 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre6g03025 802 PANTHER CATION/H + ANTIPORTER 30 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03025 Trre-Chr6 27403732 27406368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03025 20 790 Antiporter Super Family AT5G22900 33.863 8.44e-142 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03025 K26731 - mtr:11420455 990.719