Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03001 ATGGAGTTAATATCTTGCTACCAGATAATTGTAGAATCAAAGGATTGCTTTAATTTGACGAAAGAGAATTACAACGAAAAAGAAGATTATTCCAATTCAAAGCTCGTTCACAAGTCAAGGGAGAATGATATTATTCTTCTTGATGATGATGATGATCCTTGGCAATTTAGGTGGATTAACTATTTGGGACCTGATATAAAGAGAGGACATTTCACAAATGAAGAAGAGGAAAATATCATTAAACTCCATGAAATGCTTGGGAACAGCAGCTGA 273 0.3407 MELISCYQIIVESKDCFNLTKENYNEKEDYSNSKLVHKSRENDIILLDDDDDPWQFRWINYLGPDIKRGHFTNEEEENIIKLHEMLGNSS 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03001 90 SUPERFAMILY Homeodomain-like 56 89 IPR009057 -
Trre6g03001 90 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 90 IPR017930 -
Trre6g03001 90 PANTHER MYB DOMAIN PROTEIN 55 56 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03001 Trre-Chr6 27218382 27220516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03001 55 88 MYB Transcription Factor Family AT4G38620 70.588 2.60e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g03001 K09422 - mof:131150687 63.929