Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02997 ATGGGAGAAATACATAGTGAGGTAACATGGGAGAAGGAGGAGGAAGAAAAAGAAGAAGAACAAGCTCAAGTAGAAATATGGAAATACATATTTGGTTTTGTAGAACTTTCAGTGGTGAAATGTGCAATTGAACTTGGCATAGCTGATGCCATTGAAAACCACAAAAAACCCATGTCACTAATAGAGTTATCAACAACTCTAAAATGTGACTCTTCATATCTTAACCGCATCATGAGATTCCTAGTAAATAGAAAAATATTCAAAACCATAAATACCAACCATGATACTTATCCTAGTTATGTCCAAACACCACTTTCTCGCCGTTTGATTCGAAACGGCGAGAAAAACATGACTGCTTTTCTTTTACTAGAGAGCAGTCATGTTATAGTAGCACCATGGCTTAGTTTAAGTGGTCGTGTTTTGGTTAATGGCAATCCTTCTTTTGAGAAGGTTCATGGTGAAGATGTGTGGCGTTATGCTGCTTCAAATAATGATCATAGTAATCTTATTAATGATGCTATGGCTTGTGATGCTAAAGTTGTTGTGCCAGCAATTGTTAAAGGTTGTAGTGAGGTTTTTGATGGTGTTGGTTCCTTGGTGGATGTGGGTGGAGGGAATGGTACCACCATGAGTATCCTTGTTAAGGCTTTTCCTTGGATTCATGGAATTAATTTTGATCTTCCTCATGTCATTGATGTGGCTCCAAAGTATGATGGGGTGGAACATGTGGCAGGTGACATGTTTGCAAGTGTTCCTAAAGCTGATGCTGTATTTATTAAGTGGGTTTTACATGATTGGGGGGATGATGAGTGCATCCAAATCTTGAAGAAATGTAGGGAAGCTATTCCAAAAGAAAAAGGAAAAGTTATTATTGTGGAAGCAGTTAGATATGGCACACACTAA 903 0.381 MGEIHSEVTWEKEEEEKEEEQAQVEIWKYIFGFVELSVVKCAIELGIADAIENHKKPMSLIELSTTLKCDSSYLNRIMRFLVNRKIFKTINTNHDTYPSYVQTPLSRRLIRNGEKNMTAFLLLESSHVIVAPWLSLSGRVLVNGNPSFEKVHGEDVWRYAASNNDHSNLINDAMACDAKVVVPAIVKGCSEVFDGVGSLVDVGGGNGTTMSILVKAFPWIHGINFDLPHVIDVAPKYDGVEHVAGDMFASVPKADAVFIKWVLHDWGDDECIQILKKCREAIPKEKGKVIIVEAVRYGTH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02997 300 Gene3D Vaccinia Virus protein VP39 111 299 IPR029063 -
Trre6g02997 300 Gene3D - 8 109 IPR036388 -
Trre6g02997 300 Pfam Dimerisation domain 38 82 IPR012967 GO:0046983
Trre6g02997 300 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 296 IPR029063 -
Trre6g02997 300 PANTHER O-METHYLTRANSFERASE 36 295 IPR016461 GO:0008168
Trre6g02997 300 Pfam O-methyltransferase domain 133 295 IPR001077 GO:0008171
Trre6g02997 300 FunFam O-methyltransferase family protein 10 109 - -
Trre6g02997 300 SUPERFAMILY "Winged helix" DNA-binding domain 16 113 IPR036390 -
Trre6g02997 300 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 300 IPR016461 GO:0008168
Trre6g02997 300 PIRSF O-mtase 5 298 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02997 Trre-Chr6 27118989 27121766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02997 12 295 Monolignol Biosynthesis Gene Families AT1G77520 35.216 1.00e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02997 K22588 - cave:132167621 383.259