Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02950 ATGGCGGCGAGCAAGAAAGGGAGTATAAGTTTAGAAGGAAAGAAGGTTATATTGGTCCCTTACATGGAACCTCACGTTCCCAAATATCACCAATGGATGCAAGATCCTTCTCTTCTTGAAGCCACTGCTTCCGAACCTCTTTCCCTCGAGCAAGAGTATCAGATGCAACTTTCCTGGTCACGTGATCTTAACAAGGAGACATTCATTGTCTTGGATAAAGATTTGCTTGTTGGAACCTTCTCTCACGGTCAACCCCATGTTGAAGCTATGGTTGGTGATGTAAATATCTTTATGAATGACCTCAATAATCCTCAAATTGCAGAGGTTGAAATTATGATAGCTGAACAAACAAGCCGTGGCAAAGGACTTGGAAAGGAGTCTGTTCTGATAATGATGGCCTTTGCTATTGAGAAATTGGGGATCAAAACCTTTCAGGTTAAAATTGGAGAATCAAATGTAGAGTCCATCAACCTGTTCAAAAAATTGGGATTTGTGCAAACTTCACATAGCAACATTTTCAAAGAGGTGACTTTGGAGTTGCAAATAACCGAAGCTAAGAGCGAGGAGATGCTTTGTTTGATGGGTTCTGTGATCAAACACACATAA 606 0.4076 MAASKKGSISLEGKKVILVPYMEPHVPKYHQWMQDPSLLEATASEPLSLEQEYQMQLSWSRDLNKETFIVLDKDLLVGTFSHGQPHVEAMVGDVNIFMNDLNNPQIAEVEIMIAEQTSRGKGLGKESVLIMMAFAIEKLGIKTFQVKIGESNVESINLFKKLGFVQTSHSNIFKEVTLELQITEAKSEEMLCLMGSVIKHT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02950 201 PANTHER N-ACETYLTRANSFERASE 9 6 191 IPR039135 GO:0008080
Trre6g02950 201 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 4 171 - -
Trre6g02950 201 Pfam Acetyltransferase (GNAT) domain 16 165 IPR000182 GO:0016747
Trre6g02950 201 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 167 IPR016181 -
Trre6g02950 201 Gene3D - 5 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02950 Trre-Chr6 26619732 26623540 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre6g02950 Acetyltransf_3 4.7e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02950 K25762 - gmx:100817900 308.145