Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02946 ATGGTCATGGTCTCATGGATATGCACCAATCTTAGCACAAGGCAAATTGCAGTGGAAGATGCTCCAAGAAAAAGATCAATGGATCTTAGATTATTTCATGGAGTTGCTTATGGTCACTCTTGGTTTGGTAGGTGGGGCTATAAGATCCGTCGTGGAAGCTTTGGTGTGACGGCACAAAACTACTATGAAGCAATGGAAACTCTGGGTTCATTAGTGCTTGATGATATTGTAAGAGATTTGAGTAAGACAAAATATCATAAAGATATCAAACAAATGATTTGTTTCTATAGAGATATGAGTGAAACTCTAATAGTCACAATAAGGGAACTTCTTAGATTCATGCTTAATATCTTATTAGAATGA 363 0.3636 MVMVSWICTNLSTRQIAVEDAPRKRSMDLRLFHGVAYGHSWFGRWGYKIRRGSFGVTAQNYYEAMETLGSLVLDDIVRDLSKTKYHKDIKQMICFYRDMSETLIVTIRELLRFMLNILLE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02946 120 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 3 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02946 Trre-Chr6 26600439 26600801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02946 2 117 PHD Transcription Factor Family AT5G22260 38.136 3.01e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02946 K26271 - gmx:100797388 158.303