Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02934 ATGGGGAAGTATAATTTAGCAAATGAAAGAAAAAAAGATTGGCTTGATGCACTTTTGATAGATAACTTTGGTAATTGCAAGAACCATCAAGAAAAGTTTAATGAGAAGAATGTGTTTTGTGTAGATTGTGGAATGAGTTTATGTAGACATGGTAAAGAATCTCATTCTCTTCATCAAAGGTTTCAAATTTACAAATATTGTTATCAAGATGTTGTCAAATATTCTGACCTACTCAAGTATTTTGATTGCTCAAATATTCAGACATATATATTAAACAATAACAAGACTGTGCATCTCAAACCTCGACCTTTATCAAAAGAAAAGAAACTAGCAATAAAACCTAAAGTTGCTGGTTTAAGCCATGAGTCACAAATCAAGGAAACAAAAACATCAACATCTCATAAAAAGCTTGGTGGAATTTGTAAAGAATGTGGCAAACATTTACAAGACAAGCGTAACCGATTTTGTTCCGTTAGATGCAAGATGTCAATTGAGGAGCTTGGACTAGTAAACCAAAATTATCATAACCAAAATTCAGAGGCTGAATCATCTATTTCTATGGCTGAACCACATGAATATGTTGAAAGAGTGAATTTCAGAAAGCGTCCAAGGAAAAGCATCCCTATGAGATCTCTCTCTAGCTTTGTATTTTGCAATTGA 660 0.3288 MGKYNLANERKKDWLDALLIDNFGNCKNHQEKFNEKNVFCVDCGMSLCRHGKESHSLHQRFQIYKYCYQDVVKYSDLLKYFDCSNIQTYILNNNKTVHLKPRPLSKEKKLAIKPKVAGLSHESQIKETKTSTSHKKLGGICKECGKHLQDKRNRFCSVRCKMSIEELGLVNQNYHNQNSEAESSISMAEPHEYVERVNFRKRPRKSIPMRSLSSFVFCN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02934 219 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 176 - -
Trre6g02934 219 Pfam PLATZ transcription factor 65 162 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02934 Trre-Chr6 26513843 26515568 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre6g02934 PLATZ 7.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02934 - - mtr:25482577 275.404