Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02925 ATGGAAGCAAAGAAAGAGGAGGCACTTAAAGCGATAGCGAATGCTGAGAAAAGATTTGCTCATAGAGATTTTGTTGGAGCAAAAAGTTATGCTTTAAAAGCCAAAACACTGTGTCCTGGATTAGAGGGTATATCTCAATTGGTGACCACTTTCGAAGTTTACATTGCCTCTCAAGTTACCTGCAATGGTGAACTAGATTGGTATTCCATTATGGGTTTAAAACCTTCGACAAATATAGAAGCTGTGAAGAAACGGTACAAGAAGATGGCTGGGTTGCTCCACCCTGATAATAACAAGTGTGTCGGAGCTGATGGGGCATTTCATCTTGTTTCTGAGGCATGGAGTAGACTGTCTGGTAGTTATGATCTGAAGAGAAATGCACAATCGGGTGCTGGGCATGGACTTCATCATAAGGGTTTGTCTTCGGTTCATGCCTCTGGTGGTAATCAGGATACTTTCTGGACGATTTGTACTTCTTGCAAAGTTCAGTATGAGTATCTGCGCAAGTATATAAATAAGAAACTTTCTTGTAAGAATTGCCGTGGGGTTTTCATTGCTGTTGAAACAGCCCCGGCAAATGGTTCATTCCCGTATTGTCCTTGGTCTTATGGGTCTAGCAGTGGTTATGGAAGCCATTCATATGATGGTGTTACATATGTTCCCACTAATGGCGCCTATTTCAATGGTAATGGAGTTACCGGATACCACTCGTCACACGGATATGAGTATGCTTCAAATGTTCCATATCAAATTAGCTCTGCTGGATATGTCAATCAAAATGGATCAACTACCTTACCTGCTTGTCAGGCCAATGGGCATGCAAAGAGGGGAAGACCAAAAGTTAAATCAGGAGCTGATAGGAAGCATTGCATGACAGAGACAGTGGTCAATATAAATTCAGATGTATCATTCTCCCGGAATGAACCACAGGATGTTAAGCCGAGTAGACCTGAGAAGAAAAGGAAAGTTCTAGGAGCCAGTTTAAGAGATGTCCATGAAGGAAAGGGTTTAAAATGTGCTTCAGAGTCAGGATTGGCTAATGGGAATGGAAGCGCTGTGCATGGCCAGAGGCTTTCCTGTACAAGTGAAGTTCCAACCAAACAGTATGCCAAACAGTATTCCATGGCACCAGCTTTTGATGCAAGAAAATTATTGATTGAGAAAGCCAGGACAGAAATTAGGAAAAAACTGGAAGAGATGAAGTTGGCATCTGAAACTGCAGCTGCTGTTAATGAGAGAAAGAAATCGCAAGCTGATGTTGGTCAGGTCAAAGGAGACACACACATTAAAACAGTTCTGAACGTTTCTGATATTCAGTTAGAACATAGGAAAACTGTTCCAGTGACAATTACTGTCCCAGATCCTGACTTTCATGACTTTGACAAAGATAGGTCAGAGGCGTGCTTCAAGCCCAAGCAAATATGGGCCTTGTATGATGAGGAGGATGGGATGCCCCGCTTGTATTGTCTGATACGCGAGGTTGTGTCTGTCAATCCATTCAAGATTAACATTAGTTACTTGAGTTCAAAAACTGATGGCGAGTTTGGCCAAGTGAACTGGCTTGTTTCTGGTTTCACCAAATCTTGTGGAAATTTCAGGGCCATGACCTCTGATGTTGTTGACCAAGTTAACATTTTTTCTCATGCTCTAAGCAGGGTGAAGGCTGGTCGAGGCGGTTGTGTTCGCATATATCCCAAATGTGGAGAAATTTGGGCTGTTTACAGAAACTGGTCAACAGATTGGAACAGATCTACACCAGATGAAGTAAGGCATCAATACGATATGGTGGAGGTGCTGGATGATTATTCTGAGGAGCTTGGTCTTTGCATTAGCCCTCTTATTAAGTTGGATGGATTCAAAACCGTGTACAAGAGGAACGCAGACAAAAGTGCCATTCGATGGATTCCAAGAAGAGAAATGTTGCGCTTTTCACACCAAGTGCCTTCGTGGTTGTTGAAGGGGGAGGAAGCAAGCAATTTGCCTGACAAATGTTGGGACCTTGATCCAGCTGCAACTCCTGACGAGCTCCTTCATGCTGCAATAGAAGCAGAAAATGCTTCGTAG 2064 0.4297 MEAKKEEALKAIANAEKRFAHRDFVGAKSYALKAKTLCPGLEGISQLVTTFEVYIASQVTCNGELDWYSIMGLKPSTNIEAVKKRYKKMAGLLHPDNNKCVGADGAFHLVSEAWSRLSGSYDLKRNAQSGAGHGLHHKGLSSVHASGGNQDTFWTICTSCKVQYEYLRKYINKKLSCKNCRGVFIAVETAPANGSFPYCPWSYGSSSGYGSHSYDGVTYVPTNGAYFNGNGVTGYHSSHGYEYASNVPYQISSAGYVNQNGSTTLPACQANGHAKRGRPKVKSGADRKHCMTETVVNINSDVSFSRNEPQDVKPSRPEKKRKVLGASLRDVHEGKGLKCASESGLANGNGSAVHGQRLSCTSEVPTKQYAKQYSMAPAFDARKLLIEKARTEIRKKLEEMKLASETAAAVNERKKSQADVGQVKGDTHIKTVLNVSDIQLEHRKTVPVTITVPDPDFHDFDKDRSEACFKPKQIWALYDEEDGMPRLYCLIREVVSVNPFKINISYLSSKTDGEFGQVNWLVSGFTKSCGNFRAMTSDVVDQVNIFSHALSRVKAGRGGCVRIYPKCGEIWAVYRNWSTDWNRSTPDEVRHQYDMVEVLDDYSEELGLCISPLIKLDGFKTVYKRNADKSAIRWIPRREMLRFSHQVPSWLLKGEEASNLPDKCWDLDPAATPDELLHAAIEAENAS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02925 687 Pfam Domain of unknown function (DUF3444) 449 656 IPR024593 -
Trre6g02925 687 ProSiteProfiles dnaJ domain profile. 66 132 IPR001623 -
Trre6g02925 687 SMART dnaj_3 65 122 IPR001623 -
Trre6g02925 687 SUPERFAMILY Chaperone J-domain 56 120 IPR036869 -
Trre6g02925 687 PANTHER BNAC03G44070D PROTEIN 1 673 - -
Trre6g02925 687 Pfam DnaJ domain 66 118 IPR001623 -
Trre6g02925 687 MobiDBLite consensus disorder prediction 267 287 - -
Trre6g02925 687 Coils Coil 386 406 - -
Trre6g02925 687 CDD DnaJ 66 118 IPR001623 -
Trre6g02925 687 Gene3D DnaJ domain 54 122 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02925 Trre-Chr6 26450704 26452767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02925 5 243 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.757 3.78e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02925 - - gmx:100792639 1011.91