Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02854 ATGTTACAGTTAAATGCTAACACCACGTTCGTTGAGGAGCATGACAATGGCAGTATCCCTCTCCATGCTTTTGAATTTGTCAAGTATCCACAATTGGAGGCTCGAATTGACAAGCCTGTGTTGACAGATTTAATTGGAGTTATAGTTGATGTCAATCCAATTGAAGAAAGGAGAACTCCTGGTGGTAAAGTGGACATGTTGTCCATTCGGCTGAAACATATAAGTGGGAACACAATCAACGTCACATTGTGGGGACAATATGCTACAATTTTTTAG 276 0.4022 MLQLNANTTFVEEHDNGSIPLHAFEFVKYPQLEARIDKPVLTDLIGVIVDVNPIEERRTPGGKVDMLSIRLKHISGNTINVTLWGQYATIF 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02854 91 Gene3D - 18 91 IPR012340 -
Trre6g02854 91 SUPERFAMILY Nucleic acid-binding proteins 24 91 IPR012340 -
Trre6g02854 91 CDD RPA1_DBD_B_like 43 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02854 Trre-Chr6 25561735 25562184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02854 2 87 Core DNA Replication Machinery Family AT5G45400 28.736 3.16e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02854 K07466 - tpra:123895821 153.68