Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02843 ATGGAAGCTTTATCCCTTTCCATTCCAATAATCAGTGTTACCAATACCAACTACATTTCTCTCAGTGCTGCTACGAACTATGCCTCACTCTCTTCCTTACACCACCGCACTTCTTCTTCCTCAACCAGACCCTTCACCTTGAAGAAGACTGTTGTTCGTGTACAAGCTGAGAGTGAAGATTTTGAATTGAAGCAAGTCAGGGATATGGCTGCTGCCAAAAAGAGATGGGAAACTCTGCTCAGGGATGAAAAAATTAAGGTTCTTACCCCAAAAGAAGCTGGTTATGCAGTACAGCTTTCGAACAAGCCCCTTCTTGATGTTCGCCCCTCAAATGAACACAACAAGGCATGGGTGAAAGGTTCAACCTGGATTCCAATATTCGATGTTGATAATGGACTAGATGTTGGAACTATTCCCAAAAAAGTTACAAATTTCGCTATGGGAGGTTGGTGGAGTGGCATGCCTACACTGTCTTTTGACAACTCATTCTTACCCAAAGTTGTGGAAAAGTTCCCCAAAGATGCAGAAATAATTGTTGCATGCCAGAAGGGACTGAGATCACTAGCTGCATGTGAACTACTGTATAATGCTGGCTACAGTAACCTGTTCTGGGTTCAAGGAGGCTTCGAGGCTGCTGAAGAAGAGGATCTTGTAGTTGAGGGTCCAGTGCCTCTTAAGTTTGCTGGAATTGGCGGCATCTCAGAATTCCTTGGTTGGACTGATCAACAAAGAGCTGCTGCAGCTAAGGAAGGTTGGGGATACAGATTAGTGTTTTCTGCACGCCTGGTTGGACTATTTCTTGTTGCCGATGCATTATTTATTGGTGCTCAGCAAATTGGGCGCTATCTTCAGGAAATCAGGACCCATTGA 870 0.4437 MEALSLSIPIISVTNTNYISLSAATNYASLSSLHHRTSSSSTRPFTLKKTVVRVQAESEDFELKQVRDMAAAKKRWETLLRDEKIKVLTPKEAGYAVQLSNKPLLDVRPSNEHNKAWVKGSTWIPIFDVDNGLDVGTIPKKVTNFAMGGWWSGMPTLSFDNSFLPKVVEKFPKDAEIIVACQKGLRSLAACELLYNAGYSNLFWVQGGFEAAEEEDLVVEGPVPLKFAGIGGISEFLGWTDQQRAAAAKEGWGYRLVFSARLVGLFLVADALFIGAQQIGRYLQEIRTH 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02843 289 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 14 287 IPR044664 -
Trre6g02843 289 ProSiteProfiles Rhodanese domain profile. 98 221 IPR001763 -
Trre6g02843 289 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 84 221 IPR036873 -
Trre6g02843 289 Pfam Rhodanese-like domain 94 211 IPR001763 -
Trre6g02843 289 Gene3D - 85 254 IPR036873 -
Trre6g02843 289 CDD RHOD 104 211 - -
Trre6g02843 289 SMART rhod_4 88 218 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02843 Trre-Chr6 25490862 25494641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02843 1 289 Sulfurtransferasese or Rhodanese AT4G24750 67.007 4.70e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02843 - - tpra:123897303 536.954