Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02841 ATGGCTATGCTCCAATGGCTCAAGGAAAGCTACAAACCATTCATACTCTTTGTATTCATTTTCATGACTCTGTTAATAAAACTTATCTTTATAGACAAGTCAAGGAAGAGAAGATCTAATCTACCACCAGTTGTGGTTTCATCAGCTAGACTAGCAAAGGAAGTGTTAAAAACACATGATCTTGCACTTGCAAGCCGACCGCAACTGTTTTCCGCTAAATACCTCTTTTACAACTGCACAGACATTGTTTTTGCTCCTTATGATGCTTACTGGAGACATGTGAGAAAAATTTGCATACTTGAGCTTTTAAGTGCCAAAAGGGTAAACTCATATAGTGTTGTTAGAGAAGAAGAAGTCGCTAGTATAGTTCATAGGATTGAAGGGTCTTATCCAGGAACTATCAATTTGTCTAAGATATTGGGATTGTATGCAAATAATGTTGTTTGCCGAATAGCGTTTGGAAGGGACTTCACAGAAGGAGGAGAGAGTAAAAAATATGGGTTTCAAAAGATGCTTGATGAGTACCAGGAACTCCTTGGAGGGTTCAGTGTTGGTGACTTCTTTCCTTCTTTGGAGTTCATACACAGCTTGACAGGTATGAAAGCAAGACTTCAAGATACTTCAAGAAAATTTGATCAACTCATTGATCAGATAGTGAATGAACACAAGGCTTGCAATAAGATAAAGGAGCATAAGGACCTTGTAGATATTTTGCTTGAGGTGCAAATGAATGATTCAGGTGAATTGCCTCTAACCATCGATAATATCAAGGCAATAATCCTGGATATGTTTGCTGCTGGAACTGATACAACATTCATTACACTTGATTGGGCAATGACAGAGTTGTTAATACCTTTTGGGGCAGGTAGAAGAGGTTGTCCGGCTATTACATTTGCCATTGCAGTTGTTGAGCTTGCTCTAGCTCAACTCCTCTATAGCTTTGACTGGGAGCTTCCTCCTTGTGTTTTAGCAGAAGACTTGAATCTCACTGAAGTTTTTGGAATCTCAATGCACAGAAGAGAAAATCTTCTTGTTGTTACGAAGCCATATACTTTCTATGAAGACTCATGA 1071 0.3866 MAMLQWLKESYKPFILFVFIFMTLLIKLIFIDKSRKRRSNLPPVVVSSARLAKEVLKTHDLALASRPQLFSAKYLFYNCTDIVFAPYDAYWRHVRKICILELLSAKRVNSYSVVREEEVASIVHRIEGSYPGTINLSKILGLYANNVVCRIAFGRDFTEGGESKKYGFQKMLDEYQELLGGFSVGDFFPSLEFIHSLTGMKARLQDTSRKFDQLIDQIVNEHKACNKIKEHKDLVDILLEVQMNDSGELPLTIDNIKAIILDMFAAGTDTTFITLDWAMTELLIPFGAGRRGCPAITFAIAVVELALAQLLYSFDWELPPCVLAEDLNLTEVFGISMHRRENLLVVTKPYTFYEDS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02841 356 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02841 356 PRINTS E-class P450 group I signature 51 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02841 356 PRINTS E-class P450 group I signature 143 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02841 356 Pfam Cytochrome P450 43 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02841 356 Pfam Cytochrome P450 284 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02841 356 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 291 350 - -
Trre6g02841 356 Gene3D Cytochrome P450 35 282 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02841 356 Gene3D Cytochrome P450 283 343 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02841 356 SUPERFAMILY Cytochrome P450 39 349 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02841 356 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 286 295 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02841 Trre-Chr6 25486656 25488236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02841 42 283 Cytochrome P450 AT4G13310 38.618 3.10e-59 194