Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02840 ATGGAAGCAACATCAAGTGAAGAAGCTAGAGAATACTTGCAGAAGAAGTCGTCGACAAAACAAGTGTTGGATCATGATCGTTATAGTGTAGAGCATACAAGTCAAGGAAGAGAAGATCTAATCTACCACCAGGTCCTCCTACTACACATATCTTTACAAAGCCTTACAGACAAGTATGGGCCCTTGATTTTCTTACAACTTGGACAAATTCCAACAGTTGTGGTTTCATCAGCTAGACTAGCAAAGGAAGTGTTAAAAACACATGATCTTGCACTTGCAAGCCGACCGCAACTGTTTTCCGCTAAATACCTCTTTTACAACTGCACAGACATTGTTTTTGCTCCTTATGATGCTTACTGGAGACATGTGAGAAAAATTTGCATACTTGAGCTTTTAAGTGCCAAAAGGGTAAACTCATATAGTGTTGTTAGAGAAGAAGAAGTCGCTAGTATAGTTCATAGGATTGAAGGGTCTTATCCAGGAACTATCAATTTGTCTAAGATATTGGGATTGTATGCAAATAATGTTGTTTGCCGAATAGCGTTTGGAAGGGACTTCACAGAAGGAGGAGAGAGTAAAAAATATGGGTTTCAAAAGATGCTTGATGAGTACCAGGAACTCCTTGGAGGGTTCAGTGTTGGTGACTTCTTTCCTTCTTTGGAGTTCATACACAGCTTGACAGGTATGAAAGCAAGACTTCAAGATACTTCAAGAAAATTTGATCAACTCATTGATCAGATAGTGAATGAACACAAGGCTTGCAATAAGATAAAGGAGCATAAGGACCTTGTAGATATTTTGCTTGAGGTGCAAATGAATGATTCAGGTGAATTGCCTCTAACCATCGATAATATCAAGGCAATAATCCTGGATATGTTTGCTGCTGGAACTGATACAACATTCATTACACTTGATTGGGCAATGACAGAAAGAGGTTGTCCGGCTATTACATTTGCCATTGCAGTTGTTGAGCTTGCTCTAGCTCAACTCCTCTATAGCTTTGACTGGGAGCTTCCTCCTTGTGTTTTAGCAGAAGACTTGAATCTCACTGAAGTTTTTGGAATCTCAATGCACAGAAGAGAAAATCTTCTTGTTGTTACGAAGCCATATACTTTCTATGAAGACTCATGA 1131 0.3917 MEATSSEEAREYLQKKSSTKQVLDHDRYSVEHTSQGREDLIYHQVLLLHISLQSLTDKYGPLIFLQLGQIPTVVVSSARLAKEVLKTHDLALASRPQLFSAKYLFYNCTDIVFAPYDAYWRHVRKICILELLSAKRVNSYSVVREEEVASIVHRIEGSYPGTINLSKILGLYANNVVCRIAFGRDFTEGGESKKYGFQKMLDEYQELLGGFSVGDFFPSLEFIHSLTGMKARLQDTSRKFDQLIDQIVNEHKACNKIKEHKDLVDILLEVQMNDSGELPLTIDNIKAIILDMFAAGTDTTFITLDWAMTERGCPAITFAIAVVELALAQLLYSFDWELPPCVLAEDLNLTEVFGISMHRRENLLVVTKPYTFYEDS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02840 376 Gene3D Cytochrome P450 41 310 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02840 376 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 311 370 - -
Trre6g02840 376 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02840 376 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02840 376 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02840 376 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02840 376 Pfam Cytochrome P450 49 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02840 376 SUPERFAMILY Cytochrome P450 46 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02840 Trre-Chr6 25485244 25488236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02840 43 310 Cytochrome P450 AT4G13310 39.560 3.28e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02840 - - lang:109326078 423.32