Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02838 ATGTTGGAAGGAAAGATGTTTCAATATCTACCAACATATATGAAGCAAGTGTCTCATGACCTAAACACTACCCTTGTCACGTTTCTTTCTTTCTTCATCAGCATACTGCTGGTGTTCAAGTTCACTAGAATAAACAAAATAAATCTACCACCATCCCCACCTAGATTGCCAATAATTGGAAATTACCTTCAACTAGGAACACTTCCTCATCGCTCTTTTCAATCACTCTCACAAAAGTATGGTCCTCTAATGCTGTTACATCTTGGTCAGCTTCGTGTGTTGGTGGTTTCCTCAGTAGATATGGCTAAAGAAGTCATGCAAACACACGACACGGTTTTTGCGAGCCGACCGTGTCTGACATCAACAAAAGCCTTACTCTATGGATGTAAGGACATAGCATTTGCATGTTATGGTGATACATGGAGACAGAAAAAGAAACTGTGTGTGATTGAATTGTTGAGTCAGAAAAGGGTTCAATCGGTACAGTTTATTAGAGAAGAAGAAGCTGTGGCATTGGTTGATAAAATCCGTAAAGCGACGATTTTGAGTGATGGTTGTTGCACTGTGAACCTTAGTGAGATGATCATTGCAACTGCAAACAACATAATCAGTAGGTGTATATTTGGAAAGAAATATGATAGTGATGGTTGCAGATTCGGAAAGCTTGGAAGGAAGATAATGACTCAAGTTTCAGATTTTAGTATTGGAGATATGTTTCCTTTGTTGGGTTGGGTTGATGTTCTCACTGGCCAAATTCAAAAATTTAAGGCTACTTTTGAAGAAATGAATGATTTCTTTGATGGTGTAATTATAGAGCATAAAATGTCTAGGAGGGACCCCAACAAGAAAGATTTCCTCGACATTCTGCTTCAACTTCAGAGTGATGGTCTTTCAGAGTTCAACCTTACACAAAATGACTTCAAAGCACTCTTAATGGTTTTTCTTTCTATCCCTTTCTCCTCATGA 966 0.3841 MLEGKMFQYLPTYMKQVSHDLNTTLVTFLSFFISILLVFKFTRINKINLPPSPPRLPIIGNYLQLGTLPHRSFQSLSQKYGPLMLLHLGQLRVLVVSSVDMAKEVMQTHDTVFASRPCLTSTKALLYGCKDIAFACYGDTWRQKKKLCVIELLSQKRVQSVQFIREEEAVALVDKIRKATILSDGCCTVNLSEMIIATANNIISRCIFGKKYDSDGCRFGKLGRKIMTQVSDFSIGDMFPLLGWVDVLTGQIQKFKATFEEMNDFFDGVIIEHKMSRRDPNKKDFLDILLQLQSDGLSEFNLTQNDFKALLMVFLSIPFSS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02838 321 Gene3D Cytochrome P450 42 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02838 321 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 27 314 - -
Trre6g02838 321 Pfam Cytochrome P450 50 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02838 321 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02838 321 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02838 321 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02838 321 SUPERFAMILY Cytochrome P450 50 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02838 Trre-Chr6 25476260 25477225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02838 29 312 Cytochrome P450 AT3G48320 41.901 5.21e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02838 K20617 - gmx:100792382 312.383