Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02815 ATGATGTGTTGCTGTGTTTCTTTTGATGAAATTCAGAAATCAGAGTGGAAGTTGCATTGTCTTGAATGTGAAGCACTCTCAAGGCTAGACAACCTTAAGAGAAAATCTGTCACACCATCGATACGGTTGATGCTTAAACTTTATATTCGAAGGAAGTTGCAAGATGAGAAGATCATTCCAACCACTGCTATCGACAACTACAAGTTAGTGGAGGCATTAGTGGCTCACATGTCTGACATCAAAGAGGAGCAGCTGGTGTTGTATGCACAGATGGCTAATCTTGTACACTTAATACTACAGTGGCCTGAAATCAATATAAAAGAGATTGCAGAAATTTTTTCCAAGTTTGCATGTAATGCGCATACCATTTGTGACAGTGAGTTGAGACCTTTGGGAACAGGATTGTATCCTGTCGTTTCCATTATCAATCACAGCTGCTTGCCCAATTCAGTGTTGGTTTTTGAAGGAAGGGTAGCATCAGTACGTGCTTTGCAACATGTGCCCAAAGGGACTGAGGTATTGATAAGTTATATAGAGACAGCTGGAAGCACCGTGACTCGACAAAAGGCTCTCAACGAGCAGTACTTATTCACTTGTGTTTGTCCCCGCTGTTCTAAAGTGTTAGTTTTGAAGGGTCAGTATGAAGATGTTCCAGAAAATGCAATTCTAGAAGGATACAGATGCAAAAATGAAACATGTGATGGTTTCTTGCTCCGCACAACTGACGGAAAAGAATTTCAATGCGAAGAATGTGGGTTAGTTAGAGACAAGGAAGAGATAAAGCAAATTGCAACTGAAATTAAATTGCTATTAGAAGAAGCTTCTAAGCCTTCTTCCAGTGACAATTATCAAGATGCTATTTCCATATATAAAATGATTGAGAAACTGCAAACAAAACTATATCATCCTTTCTCAATCAATTTGATGCAAACACGAGAGACAATTTTGAAGTCACTAATGAAGCTGGAACATTGGAGGGAAGCTTTAGCATATTGCAAATTGACCATACCAATCTATCAAAGAGTGTATCCTGCTGTTCACCCTCTGCTTGGATTGCAGTATTATACTTGTGGAAAACTTGAATGGTATCTTGGAGACACAGAAGAAGCTGTTAAATCATTGACGAAAGCTGTGGATATACTAAGGATTACTCATGGCACAAACACTCCTTTTGTGAAGGAACTCTTGATGATGTTGGAGGAAGCTCGTGCAGAAGCGTCTTACAAATTGTCGTCGAAAGAGGAGTAG 1248 0.395 MMCCCVSFDEIQKSEWKLHCLECEALSRLDNLKRKSVTPSIRLMLKLYIRRKLQDEKIIPTTAIDNYKLVEALVAHMSDIKEEQLVLYAQMANLVHLILQWPEINIKEIAEIFSKFACNAHTICDSELRPLGTGLYPVVSIINHSCLPNSVLVFEGRVASVRALQHVPKGTEVLISYIETAGSTVTRQKALNEQYLFTCVCPRCSKVLVLKGQYEDVPENAILEGYRCKNETCDGFLLRTTDGKEFQCEECGLVRDKEEIKQIATEIKLLLEEASKPSSSDNYQDAISIYKMIEKLQTKLYHPFSINLMQTRETILKSLMKLEHWREALAYCKLTIPIYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEEAVKSLTKAVDILRITHGTNTPFVKELLMMLEEARAEASYKLSSKEE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02815 415 Gene3D - 9 35 - -
Trre6g02815 415 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 4 401 - -
Trre6g02815 415 Pfam SET domain 110 177 IPR001214 GO:0005515
Trre6g02815 415 SUPERFAMILY SET domain 115 205 IPR046341 -
Trre6g02815 415 Coils Coil 253 273 - -
Trre6g02815 415 Gene3D SET domain 121 204 IPR046341 -
Trre6g02815 415 SUPERFAMILY TPR-like 279 385 IPR011990 GO:0005515
Trre6g02815 415 Gene3D Tetratricopeptide repeat domain 335 413 IPR011990 GO:0005515
Trre6g02815 415 ProSiteProfiles SET domain profile. 45 178 IPR001214 GO:0005515
Trre6g02815 415 Gene3D - 36 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02815 Trre-Chr6 25316726 25320609 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre6g02815 SET 1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02815 K11426 - gmx:100789518 666.381