Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02814 ATGGAATCTAAATCTAAACCCTTGAACGCTATTAAGATCCTCTATAGCTACGGTGGCAAGATCCTTCCTCGTTCCACTGACGGTGAACTCCGTTACGTCGGCGGTCACACCAGAGTTCTCTCCGTTGATCTTTCAATTTCATTCTCAGAATTGATTGTGAAACTCGAAGAATTGTGTGGTTCATCTGCGAAGTTAAGGTGTCAATTACCAAACGGAGACTTGGAAACGTTGATCTCCATCACCAACGACGAAGATTTAGCCAATATAATCAATGAATACGAACGTGTCTCGTTGAAATTAACTCATCCATTGAAGATCAGAGCCATTATTTTGCAACCGAAATCGCTCGTTAAAGTTTCTTCAGATCCGTCATCTACTTCGTCCAGTGCCAGTCGTTCTCCTTCCAGATCGCCTCATACCTCCGCTGAATCGCTGCCTTACGCGGTGGCGTATCGTATCGGACGACACAGTCGCTCGCCGCGTGCGCCGTTCGGTTATTCATTCGGCGTCAAGAATGGATCGGCGAAAGCTTGTTGCAATATGGGCCAGTTCGGTGGAAGCCCAAGGTCCTTGTATTATGGGCCTCGTTGCAATAATTACTGCCATTAA 609 0.4647 MESKSKPLNAIKILYSYGGKILPRSTDGELRYVGGHTRVLSVDLSISFSELIVKLEELCGSSAKLRCQLPNGDLETLISITNDEDLANIINEYERVSLKLTHPLKIRAIILQPKSLVKVSSDPSSTSSSASRSPSRSPHTSAESLPYAVAYRIGRHSRSPRAPFGYSFGVKNGSAKACCNMGQFGGSPRSLYYGPRCNNYCH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02814 202 SMART PB1_new 25 104 IPR000270 GO:0005515
Trre6g02814 202 MobiDBLite consensus disorder prediction 119 142 - -
Trre6g02814 202 SUPERFAMILY CAD & PB1 domains 27 114 - -
Trre6g02814 202 Gene3D - 31 110 - -
Trre6g02814 202 CDD PB1_UP2 16 108 - -
Trre6g02814 202 PANTHER OS05G0427100 PROTEIN-RELATED 4 137 - -
Trre6g02814 202 Pfam PB1 domain 28 99 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02814 Trre-Chr6 25299680 25300378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02814 8 92 MAP Kinase Kinase Kinase AT2G35050 45.882 1.04e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02814 - - vra:106761207 251.906