Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02742 ATGCAGACTACTGCTTTCACTCTCTCCCCTTCTCTCCCTCTCCGTCACAACAACCTCAACCGTTTCAACCGTTCTTTTAATCTCCGTCTCTCCGCCAAATCAAACGACGCCGTTAATCCAAATGCCGCTTCTTCTTCTTCTTCATTCACTCGTCAATCATGGTCCCTTTCTCCTTCCTCTTCTTTCAAATTCAGACCTCAACCTCTCCTTTCTTCCGACTCCTTCGATCTTTCTCCTCCTAAAGCCACTGCCGAAAACTCCGGTGAATCCGCCGCCGATTCTAGTTCCTTACTCAAAACTCTTCAACTTGGTTCCTTGTTCGGTTTATGGTACCTCTTTAACATCTACTTCAATATCTACAACAAACAGGTTTTGAAGGCGTGTCATTTCCCTGTAACTGTAACTGTAGTTCAATTTGCTGTTGGAACTGTTCTTGTTAGTGTTATGTGGGCTCTTAATCTATACAAGAGACCTAAAATCACTGGTGCCATGCTTGCAGCGATATTTCCACTCGCGGTGGTGCATACTTTGGGGAATCTTTTCACAAATATGAGTCTTGGAAAGGTGGCTGTGTCATTCACACACACTATTAAAGCTATGGAGCCTTTCTTTTCTGTCATCCTTTCTGCCATGTTCCTTGGAGAGATGCCTACCCCTTGGGTGGTTGGTTCCCTCCTGCCTATTGTTGGTGGAGTTGCACTGGCGTCTGTTACTGAGGCCTCGTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATGTGACAAACCAATCGCGTAATGTTCTTAGCAAAAAGGTCATGGTTAAGCAAGAGGAATCCTTGGACAACATAACTCTCTTCTCTATAATAACAATAATGTCCTTCTTCTTGTTAGCACCCGCGGCTATCTTCATGGAGGGTGTCAAATTTACCCCTGCTTACCTGGAATCTGTTGGCTTAAATGTTAGGCAAGTGTACACTAGATCTCTTCTTGCTGCACTCTGTTTTCATGCATATCAGCAAGTTTCTTACATGATATTGCAGAGGGTATCACCTGTTACCCATTCAGTCGGCAACTGTGTGAAGCGTGTTGTGGTCATTGTGAGCTCTGTTATCATCTTCAAAACAGCTGTCTCTCCCTTGAATGCTGCTGGTACCGCTATAGCTCTTGCTGGTGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGTCAAAACCAAAGACAGCTTAA 1212 0.4439 MQTTAFTLSPSLPLRHNNLNRFNRSFNLRLSAKSNDAVNPNAASSSSSFTRQSWSLSPSSSFKFRPQPLLSSDSFDLSPPKATAENSGESAADSSSLLKTLQLGSLFGLWYLFNIYFNIYNKQVLKACHFPVTVTVVQFAVGTVLVSVMWALNLYKRPKITGAMLAAIFPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEMPTPWVVGSLLPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKQEESLDNITLFSIITIMSFFLLAPAAIFMEGVKFTPAYLESVGLNVRQVYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFKTAVSPLNAAGTAIALAGVFLYSRVKRIKSKPKTA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02742 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 237 - -
Trre6g02742 403 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 401 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre6g02742 403 PANTHER SOLUTE CARRIER FAMILY 35 102 397 - -
Trre6g02742 403 Pfam Triose-phosphate Transporter family 101 391 IPR004853 -
Trre6g02742 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02742 Trre-Chr6 24497972 24501055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02742 1 403 Antiporters AT5G33320 68.675 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02742 K15283 - gmx:100804563 569.311