Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02740 ATGGAAGAAACATTTGTTCCCTTCCGCGGGATTAAGAATGACTTCAAAGCAAGAATTGTATGCTATAAACAAGATTGGACCAGCGGATTCCGCGCAGGTGCAAGGATCCTTGCACCAACTACATACATATTTTTTGCTTCGGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAGAGAAGTACAGATGGAACTCTCACTGCTGTTCAAACTCTTGCATCAACTGCACTATGTGGTATTATCCACTCAATTATTGGAGGCCAACCTCTCCTCATACTAGGTGTAGCTGAGCCAACAGTTCTGATGTATACATTCATGTACAATTTCGCAAAGGATCGCGAGGATTTAGGACACAAACTATTCCTGCCTTGGACCGGATGGGTGTGCGTTTGGACTGCACTGTTGCTCTTCTTGCTGGCCGTTCTCGGTGCATGCTCCATAATCAACCGATTCACACGCCTTACTGGTGAACTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTACCAAAGACGCAGACAGAAGGTACCAATCAGATTGCACTCCAACCCTCTTGGTTGTTTGGCAATGGAATGTTTGCTTTAGTTTTGTCGTTTGGCCTTCTTTTTACCGGTCTAGGAAGCCGCAAGGCTAGATCCTGGCGTTACGGGACAGGTTGGCTGAGAGGATTTATAGCTGATTATGGAGTTCCCTTAATGATCCTTGTATGGACAGCTGTGTCTTATATACCCGTCAACGAAGTCCCAAGGGGAGTTCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCTCTAATGTACATTATTGGAGCATTTATACCAGCAACTATGATTGCCGTGCTTTACTATTTTGATCACAGTGTTGCATCACAACTTGCGCAGCAAAAGGAGTTCAATTTAAGAAAACCGTCATCTTATCATTATGACTTGCTACTTCTGGGATTTTTGACATTATTGTGTGGGCTTATTGGAATTCCTCCTTCCAATGGCGTGATTCCACAATCTCCAATGCATACCAAGAGCTTAGCTACTCTTAAACATCAGATTTTACGGCATAAGCTTGTCTCTACTGCACGAACGAGCATGCAGAAAAACATGAACTTGAGTCAGTTATACGAAAGTATGAAAGAAGCATACGATGTAATGCAGACACCATTGGTTCCCCAAATGCCACCCACATTGGGGCTGAAAGAGTTGAAGGAGTCTACGGTTGCACTCGCTTCAAGTCATGGATACATTGATGCTCCTGTTGATGAAATTGTATTTGATGTGAATAAGGACGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTTCAGGCATCAATGGTTGCGGCTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACATCAGTGCTTTGGGGTTACTTTGCCTTCATGGCAATTGAAAGCTTGCCTGGAAATCAGTTTTGGGAGAGAATATTGTACCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAACACCATGCAACCTTTGTTGAGACTGTGCCGTTGAAAGCAATCGCTCTGTTTACTCTGTTCCAGACAGCTTACTTGCTTCTCTGCTTTGGCATTACCTGGATACCAATCGCCGGGGTCCTCTTCCCATTGTTAATCATGCTTCTTGTCCCGGTTCGACAATATTTTCTTCCCCATTTTTTCAAAGGTGCCCATCTTCAAGAGTTAGACGCAGCAGCGTATGAGGAAGCACCTGCCATTGCTTTCAACATGTCCTATGATGATCCAAGTAATCATGCAAATATCAGTGGTGGCGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGAGAGATACGTCGCACTCAAAGCTCAAAAGCTTCAAGTTCGACTGCAACACCAATAGGAGGAGATATAAGACCTTCGAATAGCCCGCAAGTATCACAAACAATTCCAAGTCCTCGAGTAACTGCATTGAGAGGCGAAAGCAGCCTAGGATCAAACGGAAGGAGTTAA 2091 0.44 MEETFVPFRGIKNDFKARIVCYKQDWTSGFRAGARILAPTTYIFFASAIPVISFGEQLERSTDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDREDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRLTGELFGLLIAMLFMQQAIKGLVEEFGVPKTQTEGTNQIALQPSWLFGNGMFALVLSFGLLFTGLGSRKARSWRYGTGWLRGFIADYGVPLMILVWTAVSYIPVNEVPRGVPRRLFSPNPWSPGAYSNWTVVKEMLNVPLMYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRHKLVSTARTSMQKNMNLSQLYESMKEAYDVMQTPLVPQMPPTLGLKELKESTVALASSHGYIDAPVDEIVFDVNKDVDDLLPVEVKEQRLSNLLQASMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEHHATFVETVPLKAIALFTLFQTAYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYFLPHFFKGAHLQELDAAAYEEAPAIAFNMSYDDPSNHANISGGEILDEIITRSRGEIRRTQSSKASSSTATPIGGDIRPSNSPQVSQTIPSPRVTALRGESSLGSNGRS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02740 696 MobiDBLite consensus disorder prediction 643 696 - -
Trre6g02740 696 Gene3D Helical hairpin bin 18 60 - -
Trre6g02740 696 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre6g02740 696 FunFam probable boron transporter 2 18 60 - -
Trre6g02740 696 Pfam HCO3- transporter family 7 183 IPR011531 GO:0006820|GO:0016020
Trre6g02740 696 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Trre6g02740 696 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Trre6g02740 696 MobiDBLite consensus disorder prediction 647 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02740 Trre-Chr6 24473041 24476760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02740 1 695 Antiporters AT3G62270 73.926 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02740 K24194 - gmx:100793554 1223.76