Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02732 ATGACTCCTATTATTACTCCAGTATCTGCTATCGTGGGTGGAAAGATTAACTTTAAGTTGAAAGTGCGTTTCATTCATATGCGGTCTATTCCTGAGTTTGGCAATCCTGCTGAAGATCAATTTATCCACATGTTGTTGCTTGATGAAAGGCTTGGAAAAATACAAGCTACAGCCAAAAAAGGCTTGACTAAAAAAATTAAAGAGGAAGTTCAAGAAGGAGAGGTATACGAAGTTGAAAATATGTTGGTGACTCATAATGATGCTGGTCATGCAGCTACCAAGCATAAATTCAGGATCAATCTTTACGACAAGACAAATTTTGTTAGAGTCACAGAAAGTAATATCCCAAAGTACCATTTTGATTTAGTTGGGTTTCAACAGATTATGGATTTCGAAAAAGAAGATCTTTTTGTTGACATTATTGGACATATTGTCGAAAAAGATCCGGTAAAAGAGACGGAGAAGAATGGAGAAAAGATGAGGCTTATTGATACTACTCTTGAAGATGCAGAGGGGCGTAGAATTCATTGCACTTTGTGGAACCATTATGCAGATCAATTGGAGAATTTCTTTGCAACCTATGAATCAACCTCTCCTCTCATTGTGCTTTTGCAACTTGCCAAGACAAAAAATTGA 636 0.3664 MTPIITPVSAIVGGKINFKLKVRFIHMRSIPEFGNPAEDQFIHMLLLDERLGKIQATAKKGLTKKIKEEVQEGEVYEVENMLVTHNDAGHAATKHKFRINLYDKTNFVRVTESNIPKYHFDLVGFQQIMDFEKEDLFVDIIGHIVEKDPVKETEKNGEKMRLIDTTLEDAEGRRIHCTLWNHYADQLENFFATYESTSPLIVLLQLAKTKN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02732 211 SUPERFAMILY Nucleic acid-binding proteins 6 108 IPR012340 -
Trre6g02732 211 Pfam Domain of unknown function DUF223 44 130 IPR003871 -
Trre6g02732 211 SUPERFAMILY Nucleic acid-binding proteins 119 202 IPR012340 -
Trre6g02732 211 CDD RPA1_DBD_B_like 139 211 - -
Trre6g02732 211 Gene3D - 4 112 IPR012340 -
Trre6g02732 211 Gene3D - 113 211 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02732 Trre-Chr6 24421335 24422248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02732 3 185 Core DNA Replication Machinery Family AT4G19130 23.280 1.18e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02732 - - mtr:112416537 237.654