Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02702 ATGATGAACTTGCAGCATTGGAAACATGGAACAATGGCAAGCTTTATGAACAATCTGCAAATATTGAAGTACCTATGTTTGTACGTATGCTTCACTACTATGCTGGCTGGTCTTCCACCAGGAGTTCTGAATGTTGTGTCTGGTTTTGGTCCAACTGCTGGTTCTTCCCTTGCAAATCATATGGATGTGGATAAGATATCATTCACCGGATCAACTGACACAGGAAAAATTATATACCAATTGGCTGCAAAGAACAATCTTAAGGCAGTGACATTGGAGCTTGGAGGAAAATCGCCATTCATAGAGTGCGAGGATGCTGATGTTGACAAGGCTGTGGAACTTGCACATTTTGCTTTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGGTCGCGTACTTATGTGCATGAGCGAATATATGACGAGTTCTTGGAGAAAGTCAAGGCAGCAGCTTTGAAACGTGTTGTTGGCGATCCATTTAAAAAAGGTGTAGAGCAAGGCCCTCAGATTGATTCACAACAGTTTGAGAAAATCCTCCATTACATCAGGTCAGGTGTTGAAAGTAATGCTACTCTAGAATGTGGTGGTGACAGAATTGGCACAAAAGGCTTCTTTGTCCAACCAACAGTCTTCTCAAATGTTCAGGATGACATGAAAATAGCTAAGGATGAGATATTCGGCCCTGTTCAGACCATATTGAAATTCAAAGACAATGATGAAGTAATAAGAAGGGCAAATGATACACGTTATGGTCTTGCTGCTGGCGTGTTCACAAAGAATTTGGACACAGCCAATACATTGATGAGAGGATTAAGGGCAGGGACGGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCATTTGGTGGGTACAAAATGAGTGGTGTAGGAAGGGAGAAGGGTGTCTATAGTCTTCATAATTACTTGCAAGTTAAGGCAGTGGTTTCACCTCTTAAGAATCCCGCATGGTTGTAA 981 0.419 MMNLQHWKHGTMASFMNNLQILKYLCLYVCFTTMLAGLPPGVLNVVSGFGPTAGSSLANHMDVDKISFTGSTDTGKIIYQLAAKNNLKAVTLELGGKSPFIECEDADVDKAVELAHFALFFNQGQCCCAGSRTYVHERIYDEFLEKVKAAALKRVVGDPFKKGVEQGPQIDSQQFEKILHYIRSGVESNATLECGGDRIGTKGFFVQPTVFSNVQDDMKIAKDEIFGPVQTILKFKDNDEVIRRANDTRYGLAAGVFTKNLDTANTLMRGLRAGTVWINCFDVFDAAIPFGGYKMSGVGREKGVYSLHNYLQVKAVVSPLKNPAWL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02702 326 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 120 131 IPR016160 GO:0016491
Trre6g02702 326 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 101 321 IPR016163 GO:0016620
Trre6g02702 326 Pfam Aldehyde dehydrogenase family 33 316 IPR015590 GO:0016491
Trre6g02702 326 FunFam Aldehyde dehydrogenase, putative 288 314 - -
Trre6g02702 326 FunFam Mitochondrial aldehyde dehydrogenase 2 98 287 - -
Trre6g02702 326 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 100 IPR016162 GO:0016491
Trre6g02702 326 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 316 - -
Trre6g02702 326 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 92 99 IPR029510 GO:0016491
Trre6g02702 326 SUPERFAMILY ALDH-like 35 319 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02702 Trre-Chr6 23945844 23949341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02702 36 326 Aldehyde Dehydrogenase Gene Family AT3G48000 79.725 2.93e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02702 K00128 - tcc:18603880 536.184