Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02701 ATGTCCCCATTAATTTGTTGCACATCATCTCGTGACTCAAAATTGACGACGAATTGTCGATGTGTCTTCGACTGTTATCGTGTTGGCGGTCAAATTAATTCGTCCTTCCTCACAAGTCAGTTAACCATTACAAAATCTAGAATTGTGAAGTTTAGCACAGCTGCAGAAGTTGATGAATTAATCACACCATCTGTGAAAATAAGATACACAAAGAATCTCATAAATGGAGAATTTGTGGATGCTGCATCAGGAAAAACTTTTCCTGCTTATGATCCACGAACTGGAGAAGTGATTGCTCATGTTGCTGAAGGTGATCAAGAAGATATCAACCGTGCAGTATCTGCAGCTAGAAAAGCTTTTGATGAAGGACCACGGCCAAAGATGACCCCTTATGTATGA 399 0.3985 MSPLICCTSSRDSKLTTNCRCVFDCYRVGGQINSSFLTSQLTITKSRIVKFSTAAEVDELITPSVKIRYTKNLINGEFVDAASGKTFPAYDPRTGEVIAHVAEGDQEDINRAVSAARKAFDEGPRPKMTPYV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02701 132 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 54 130 - -
Trre6g02701 132 Pfam Aldehyde dehydrogenase family 78 122 IPR015590 GO:0016491
Trre6g02701 132 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 131 IPR016162 GO:0016491
Trre6g02701 132 SUPERFAMILY ALDH-like 64 127 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02701 Trre-Chr6 23924073 23925343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02701 52 131 Aldehyde Dehydrogenase Gene Family AT3G48000 70.000 2.27e-34 122