Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02695 ATGCATAAACTTGAACCACCTGATCAGAATTTCGCATGGGGTTGGAATCTCACATCAGATCCTTGCATTCATAACTGGCACGGTGTAACTTGCTCCGCAAACAACCAATACATTAAGAGCATAGTTCTTGAAGAACTTAATCTCACCGGTGTTCTAGACGCGACTTCTCTTTGCATTTCTACATCTCTTCAATTCGTCAGCCTCAACAATAACAATTTACACGGTTTTATATCAGAGGATATAAGAAACTGCAAGTTCTTGACACACTTGCTTCTTAGTGGTAACGAATTCTCTGGCAATCTTCCTGTTTCCATTTCTCAACTACGCAATATGAAGCGCCTTCATGTTTCCGACAATCGCTTCACCGGAAACCTTCCTAATATGGTTAATGTTACAAGCTTGATATCATTTCTTGCCCAAAACAACAAATTCACTGGTCAGATTCCTGATTTTGATTTCTCAAACTTTGAAGCTTTTAATGTCTCTAACAACGATTTACGCGGTCCTGTTCCAGATGTTAGAGGTAGATTTGGTGCTGATAGTTTTTATGGTAATCCTAATCTATGTGGAAAACCAATGTCAAACTCTTCATGTCCACCACCGCCACCACCTCCTCCAATTGCTAACAAAGACAAAATCATAAATCAATTTCTTGACGATTTACCGATTTATTCAGGTTACATAGTTATTGGTTTAATTTTATTGATTTTCTTGATCTTCAAGTTGTTAAGAAAATGCAAGACCAAAGATAAAGAAAAAGGATTAGATCATGTTGAAAAGAAGGACATGTCACAAGACACTAGTGTTGTTGTTGGAGGTGGTGAAAAGCTTAGTGAGATACTTAATTCCAATGGATCAAAGAATTGGTTTAATGGCCTTGGGATGAGATCAGAGTATTCTATGACATCTATGGAAAGTGGAGTGACTACATCAGGTCTTGTTCTTCTTTCTAGTAGAAAGCTAAGGGGATTGCAATTTGAGGATTTGTTAAGTGCTCCTGCTGAATTGATTAAGAGAGGAAAACATGGAAGTTTATACAAGGTTATGTTAGATAATGGTGTGCTTTTGGCTGTTAAGAGGATCAAGGATTGGGGAATTTCAAAGCATGATTTTGAGAGAAGGATGAATTTGATAGCTCAAGTGAAGCATCCGCTTGTAATGTCACCTGTTGCATACTATTGTTCACAGCAAGAGAAGCTTCTGGCTTATGAATATCTTCCAAATGGTAGCCTCTTCATGTTGCTCTATGGATCTCAAAGCGGACATTCTCTTGACTGGAGGAGCAGACTTGATCTTGCTACTAAGATAGCTGAAGCTTTGGCTTATATGCACGAGGAGCTTGGTGAGAGTGGAATAGCACACGGCAACTTAAAATCAAGTAACATTCTGTTTGACAAGAATATGAATCCACAAATAAGCGAATATGGCCAAATGGTTTCTCAAATAAAAAGCATAAAAAACAGAAATATGTCTGCAGCCATATTCAGAGCAGATATATACGCCTTTGGTGTGATACTTCTGGAACTCCTGACAGGGAAAGTTGTTAAAAACGATGGATTCGATTTGGTTAAATGGGTGAATTCAGTGATCAGTGAAGAATGGACTGCAGAAGTTTTTGACAGGTACCTAATCTCACAAGGTGCTTCTGAAGAGAGGATGGTGAACTTGTTGCAGGTGGCATTGAAATGCACAAATCCTTCTCCAAATGACAAGCTAAGTATGAGTCAAGTGGCACTCATCACAAATGCATTGAAAGATGAAGATGACAAATCCATATCCTTTAACACATAG 1791 0.3841 MHKLEPPDQNFAWGWNLTSDPCIHNWHGVTCSANNQYIKSIVLEELNLTGVLDATSLCISTSLQFVSLNNNNLHGFISEDIRNCKFLTHLLLSGNEFSGNLPVSISQLRNMKRLHVSDNRFTGNLPNMVNVTSLISFLAQNNKFTGQIPDFDFSNFEAFNVSNNDLRGPVPDVRGRFGADSFYGNPNLCGKPMSNSSCPPPPPPPPIANKDKIINQFLDDLPIYSGYIVIGLILLIFLIFKLLRKCKTKDKEKGLDHVEKKDMSQDTSVVVGGGEKLSEILNSNGSKNWFNGLGMRSEYSMTSMESGVTTSGLVLLSSRKLRGLQFEDLLSAPAELIKRGKHGSLYKVMLDNGVLLAVKRIKDWGISKHDFERRMNLIAQVKHPLVMSPVAYYCSQQEKLLAYEYLPNGSLFMLLYGSQSGHSLDWRSRLDLATKIAEALAYMHEELGESGIAHGNLKSSNILFDKNMNPQISEYGQMVSQIKSIKNRNMSAAIFRADIYAFGVILLELLTGKVVKNDGFDLVKWVNSVISEEWTAEVFDRYLISQGASEERMVNLLQVALKCTNPSPNDKLSMSQVALITNALKDEDDKSISFNT 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02695 596 Gene3D Transferase(Phosphotransferase) domain 1 408 487 - -
Trre6g02695 596 Pfam Protein kinase domain 337 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02695 596 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 54 148 - -
Trre6g02695 596 SUPERFAMILY L domain-like 10 175 - -
Trre6g02695 596 Gene3D Transferase(Phosphotransferase) domain 1 488 595 - -
Trre6g02695 596 PANTHER OS05G0588300 PROTEIN 11 585 - -
Trre6g02695 596 Gene3D Phosphorylase Kinase; domain 1 303 405 - -
Trre6g02695 596 Gene3D Ribonuclease Inhibitor 2 173 IPR032675 -
Trre6g02695 596 SUPERFAMILY Protein kinase-like (PK-like) 335 578 IPR011009 -
Trre6g02695 596 ProSiteProfiles Protein kinase domain profile. 331 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02695 Trre-Chr6 23827823 23830282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02695 10 587 Receptor kinase-like Gene Family AT2G36570 34.277 8.81e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre6g02695 Pkinase 3.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02695 - - pvu:PHAVU_009G180700g 773.081